Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC168Q8NDH2 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC168Q8NDH2 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC168Q8NDH2 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC168Q8NDH2 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC16.96■□□□□ 0.31
CCDC168Q8NDH2 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC16.96■□□□□ 0.31
CCDC168Q8NDH2 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC168Q8NDH2 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC16.96■□□□□ 0.31
CCDC168Q8NDH2 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC168Q8NDH2 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC168Q8NDH2 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC168Q8NDH2 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC16.95■□□□□ 0.3
CCDC168Q8NDH2 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC16.95■□□□□ 0.3
CCDC168Q8NDH2 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC168Q8NDH2 AL356652.1-201ENST00000615962 565 ntBASIC16.95■□□□□ 0.3
CCDC168Q8NDH2 AC011558.1-201ENST00000623459 338 ntBASIC16.95■□□□□ 0.3
CCDC168Q8NDH2 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC168Q8NDH2 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC168Q8NDH2 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC168Q8NDH2 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC168Q8NDH2 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC16.95■□□□□ 0.3
CCDC168Q8NDH2 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC168Q8NDH2 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC168Q8NDH2 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC16.95■□□□□ 0.3
CCDC168Q8NDH2 CD81-212ENST00000526072 1172 ntTSL 5 BASIC16.95■□□□□ 0.3
CCDC168Q8NDH2 AL445675.2-201ENST00000620291 557 ntBASIC16.95■□□□□ 0.3
CCDC168Q8NDH2 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC16.95■□□□□ 0.3
CCDC168Q8NDH2 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC168Q8NDH2 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC168Q8NDH2 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC16.95■□□□□ 0.3
CCDC168Q8NDH2 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC168Q8NDH2 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
CCDC168Q8NDH2 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC168Q8NDH2 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC16.94■□□□□ 0.3
CCDC168Q8NDH2 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
CCDC168Q8NDH2 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
CCDC168Q8NDH2 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC168Q8NDH2 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC16.94■□□□□ 0.3
CCDC168Q8NDH2 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC16.94■□□□□ 0.3
CCDC168Q8NDH2 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC168Q8NDH2 STK25-205ENST00000405883 1904 ntTSL 2 BASIC16.94■□□□□ 0.3
CCDC168Q8NDH2 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC16.94■□□□□ 0.3
CCDC168Q8NDH2 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC16.94■□□□□ 0.3
CCDC168Q8NDH2 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC16.94■□□□□ 0.3
CCDC168Q8NDH2 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
CCDC168Q8NDH2 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC168Q8NDH2 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC16.94■□□□□ 0.3
CCDC168Q8NDH2 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC16.94■□□□□ 0.3
CCDC168Q8NDH2 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC168Q8NDH2 EGLN1P1-201ENST00000531623 762 ntBASIC16.94■□□□□ 0.3
CCDC168Q8NDH2 CR392000.1-201ENST00000624770 1228 ntBASIC16.94■□□□□ 0.3
CCDC168Q8NDH2 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC168Q8NDH2 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC168Q8NDH2 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC168Q8NDH2 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC168Q8NDH2 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC168Q8NDH2 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC16.93■□□□□ 0.3
CCDC168Q8NDH2 MESTP1-201ENST00000404287 994 ntBASIC16.93■□□□□ 0.3
CCDC168Q8NDH2 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC16.93■□□□□ 0.3
CCDC168Q8NDH2 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC16.93■□□□□ 0.3
CCDC168Q8NDH2 RN7SL510P-201ENST00000581311 263 ntBASIC16.93■□□□□ 0.3
CCDC168Q8NDH2 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC16.93■□□□□ 0.3
CCDC168Q8NDH2 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC168Q8NDH2 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC168Q8NDH2 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC168Q8NDH2 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC168Q8NDH2 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC16.93■□□□□ 0.3
CCDC168Q8NDH2 HMGA1P5-201ENST00000412453 271 ntBASIC16.93■□□□□ 0.3
CCDC168Q8NDH2 KRT18P16-201ENST00000510337 1294 ntBASIC16.93■□□□□ 0.3
CCDC168Q8NDH2 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC16.93■□□□□ 0.3
CCDC168Q8NDH2 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC168Q8NDH2 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC168Q8NDH2 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC168Q8NDH2 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC16.92■□□□□ 0.3
CCDC168Q8NDH2 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
CCDC168Q8NDH2 STX5-203ENST00000394690 1568 ntTSL 5 BASIC16.92■□□□□ 0.3
CCDC168Q8NDH2 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC168Q8NDH2 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC16.92■□□□□ 0.3
CCDC168Q8NDH2 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC16.92■□□□□ 0.3
CCDC168Q8NDH2 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC16.92■□□□□ 0.3
CCDC168Q8NDH2 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
CCDC168Q8NDH2 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC168Q8NDH2 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC16.92■□□□□ 0.3
CCDC168Q8NDH2 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC168Q8NDH2 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
CCDC168Q8NDH2 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
CCDC168Q8NDH2 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC168Q8NDH2 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC168Q8NDH2 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC168Q8NDH2 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC16.92■□□□□ 0.3
CCDC168Q8NDH2 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC168Q8NDH2 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC16.92■□□□□ 0.3
CCDC168Q8NDH2 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC16.92■□□□□ 0.3
CCDC168Q8NDH2 AL121906.2-201ENST00000621597 723 ntBASIC16.92■□□□□ 0.3
CCDC168Q8NDH2 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC16.92■□□□□ 0.3
CCDC168Q8NDH2 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
CCDC168Q8NDH2 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
CCDC168Q8NDH2 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC168Q8NDH2 GCA-201ENST00000233612 1694 ntTSL 2 BASIC16.92■□□□□ 0.3
CCDC168Q8NDH2 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms