Protein–RNA interactions for Protein: Q6ZV60

LINC00173, Putative uncharacterized protein encoded by LINC00173, humanhuman

Predictions only

Length 143 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173Q6ZV60 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LINC00173Q6ZV60 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC14.6□□□□□ -0.07
LINC00173Q6ZV60 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC14.6□□□□□ -0.07
LINC00173Q6ZV60 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
LINC00173Q6ZV60 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC14.6□□□□□ -0.07
LINC00173Q6ZV60 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC14.6□□□□□ -0.07
LINC00173Q6ZV60 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
LINC00173Q6ZV60 CD72-202ENST00000378430 585 ntTSL 3 BASIC14.6□□□□□ -0.07
LINC00173Q6ZV60 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC14.6□□□□□ -0.07
LINC00173Q6ZV60 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC14.6□□□□□ -0.07
LINC00173Q6ZV60 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
LINC00173Q6ZV60 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LINC00173Q6ZV60 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC14.6□□□□□ -0.07
LINC00173Q6ZV60 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
LINC00173Q6ZV60 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LINC00173Q6ZV60 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LINC00173Q6ZV60 TREX1-205ENST00000625293 1783 ntBASIC14.6□□□□□ -0.07
LINC00173Q6ZV60 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
LINC00173Q6ZV60 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC14.6□□□□□ -0.07
LINC00173Q6ZV60 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
LINC00173Q6ZV60 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LINC00173Q6ZV60 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
LINC00173Q6ZV60 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LINC00173Q6ZV60 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
LINC00173Q6ZV60 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LINC00173Q6ZV60 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
LINC00173Q6ZV60 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LINC00173Q6ZV60 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
LINC00173Q6ZV60 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
LINC00173Q6ZV60 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
LINC00173Q6ZV60 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC14.59□□□□□ -0.07
LINC00173Q6ZV60 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC14.59□□□□□ -0.07
LINC00173Q6ZV60 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
LINC00173Q6ZV60 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
LINC00173Q6ZV60 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LINC00173Q6ZV60 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC14.59□□□□□ -0.07
LINC00173Q6ZV60 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
LINC00173Q6ZV60 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC14.59□□□□□ -0.07
LINC00173Q6ZV60 HES6-204ENST00000409182 863 ntTSL 2 BASIC14.59□□□□□ -0.07
LINC00173Q6ZV60 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LINC00173Q6ZV60 BRD4-212ENST00000630599 726 ntTSL 2 BASIC14.59□□□□□ -0.07
LINC00173Q6ZV60 AC133637.1-201ENST00000624115 1537 ntBASIC14.59□□□□□ -0.07
LINC00173Q6ZV60 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
LINC00173Q6ZV60 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LINC00173Q6ZV60 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LINC00173Q6ZV60 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LINC00173Q6ZV60 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LINC00173Q6ZV60 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LINC00173Q6ZV60 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC14.59□□□□□ -0.07
LINC00173Q6ZV60 AC012313.1-201ENST00000593393 3059 ntBASIC14.59□□□□□ -0.07
LINC00173Q6ZV60 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LINC00173Q6ZV60 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LINC00173Q6ZV60 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
LINC00173Q6ZV60 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
LINC00173Q6ZV60 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC14.59□□□□□ -0.07
LINC00173Q6ZV60 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC14.58□□□□□ -0.07
LINC00173Q6ZV60 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC14.58□□□□□ -0.07
LINC00173Q6ZV60 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
LINC00173Q6ZV60 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
LINC00173Q6ZV60 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
LINC00173Q6ZV60 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
LINC00173Q6ZV60 STX4-202ENST00000394998 1498 ntTSL 2 BASIC14.58□□□□□ -0.08
LINC00173Q6ZV60 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LINC00173Q6ZV60 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC14.58□□□□□ -0.08
LINC00173Q6ZV60 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
LINC00173Q6ZV60 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
LINC00173Q6ZV60 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
LINC00173Q6ZV60 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC14.58□□□□□ -0.08
LINC00173Q6ZV60 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LINC00173Q6ZV60 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC14.58□□□□□ -0.08
LINC00173Q6ZV60 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
LINC00173Q6ZV60 BX664725.1-201ENST00000438252 379 ntBASIC14.58□□□□□ -0.08
LINC00173Q6ZV60 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC14.58□□□□□ -0.08
LINC00173Q6ZV60 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC14.58□□□□□ -0.08
LINC00173Q6ZV60 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
LINC00173Q6ZV60 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
LINC00173Q6ZV60 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC14.58□□□□□ -0.08
LINC00173Q6ZV60 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LINC00173Q6ZV60 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
LINC00173Q6ZV60 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
LINC00173Q6ZV60 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.08
LINC00173Q6ZV60 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LINC00173Q6ZV60 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC14.58□□□□□ -0.08
LINC00173Q6ZV60 AC138932.1-201ENST00000534164 6830 ntBASIC14.58□□□□□ -0.08
LINC00173Q6ZV60 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LINC00173Q6ZV60 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC14.58□□□□□ -0.08
LINC00173Q6ZV60 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC14.58□□□□□ -0.08
LINC00173Q6ZV60 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LINC00173Q6ZV60 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LINC00173Q6ZV60 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LINC00173Q6ZV60 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC14.57□□□□□ -0.08
LINC00173Q6ZV60 AL390961.4-201ENST00000623958 2535 ntBASIC14.57□□□□□ -0.08
LINC00173Q6ZV60 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LINC00173Q6ZV60 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LINC00173Q6ZV60 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LINC00173Q6ZV60 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC14.57□□□□□ -0.08
LINC00173Q6ZV60 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LINC00173Q6ZV60 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC14.57□□□□□ -0.08
LINC00173Q6ZV60 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
LINC00173Q6ZV60 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms