Protein–RNA interactions for Protein: Q5SW96

LDLRAP1, Low density lipoprotein receptor adapter protein 1, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1Q5SW96 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LDLRAP1Q5SW96 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
LDLRAP1Q5SW96 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
LDLRAP1Q5SW96 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LDLRAP1Q5SW96 STK25-205ENST00000405883 1904 ntTSL 2 BASIC20.06■□□□□ 0.8
LDLRAP1Q5SW96 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LDLRAP1Q5SW96 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
LDLRAP1Q5SW96 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC20.05■□□□□ 0.8
LDLRAP1Q5SW96 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.05■□□□□ 0.8
LDLRAP1Q5SW96 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
LDLRAP1Q5SW96 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
LDLRAP1Q5SW96 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC20.05■□□□□ 0.8
LDLRAP1Q5SW96 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
LDLRAP1Q5SW96 NME6-213ENST00000451657 871 ntTSL 2 BASIC20.05■□□□□ 0.8
LDLRAP1Q5SW96 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC20.05■□□□□ 0.8
LDLRAP1Q5SW96 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
LDLRAP1Q5SW96 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LDLRAP1Q5SW96 AC092720.2-201ENST00000602388 1665 ntBASIC20.05■□□□□ 0.8
LDLRAP1Q5SW96 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
LDLRAP1Q5SW96 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LDLRAP1Q5SW96 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
LDLRAP1Q5SW96 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
LDLRAP1Q5SW96 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
LDLRAP1Q5SW96 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.05■□□□□ 0.8
LDLRAP1Q5SW96 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LDLRAP1Q5SW96 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LDLRAP1Q5SW96 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LDLRAP1Q5SW96 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LDLRAP1Q5SW96 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
LDLRAP1Q5SW96 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
LDLRAP1Q5SW96 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
LDLRAP1Q5SW96 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
LDLRAP1Q5SW96 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC20.04■□□□□ 0.8
LDLRAP1Q5SW96 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
LDLRAP1Q5SW96 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
LDLRAP1Q5SW96 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
LDLRAP1Q5SW96 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
LDLRAP1Q5SW96 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.04■□□□□ 0.8
LDLRAP1Q5SW96 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
LDLRAP1Q5SW96 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
LDLRAP1Q5SW96 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
LDLRAP1Q5SW96 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LDLRAP1Q5SW96 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LDLRAP1Q5SW96 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
LDLRAP1Q5SW96 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
LDLRAP1Q5SW96 APTR-205ENST00000447009 902 ntTSL 2 BASIC20.04■□□□□ 0.8
LDLRAP1Q5SW96 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC20.04■□□□□ 0.8
LDLRAP1Q5SW96 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC20.04■□□□□ 0.8
LDLRAP1Q5SW96 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
LDLRAP1Q5SW96 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LDLRAP1Q5SW96 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
LDLRAP1Q5SW96 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC20.04■□□□□ 0.8
LDLRAP1Q5SW96 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC20.04■□□□□ 0.8
LDLRAP1Q5SW96 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
LDLRAP1Q5SW96 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
LDLRAP1Q5SW96 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.03■□□□□ 0.8
LDLRAP1Q5SW96 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
LDLRAP1Q5SW96 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC20.03■□□□□ 0.8
LDLRAP1Q5SW96 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
LDLRAP1Q5SW96 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
LDLRAP1Q5SW96 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
LDLRAP1Q5SW96 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC20.03■□□□□ 0.8
LDLRAP1Q5SW96 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LDLRAP1Q5SW96 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
LDLRAP1Q5SW96 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LDLRAP1Q5SW96 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
LDLRAP1Q5SW96 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.03■□□□□ 0.8
LDLRAP1Q5SW96 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.02■□□□□ 0.8
LDLRAP1Q5SW96 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LDLRAP1Q5SW96 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LDLRAP1Q5SW96 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.02■□□□□ 0.8
LDLRAP1Q5SW96 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
LDLRAP1Q5SW96 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LDLRAP1Q5SW96 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC20.02■□□□□ 0.8
LDLRAP1Q5SW96 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC20.02■□□□□ 0.8
LDLRAP1Q5SW96 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
LDLRAP1Q5SW96 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC20.02■□□□□ 0.8
LDLRAP1Q5SW96 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC20.02■□□□□ 0.8
LDLRAP1Q5SW96 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC20.02■□□□□ 0.8
LDLRAP1Q5SW96 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
LDLRAP1Q5SW96 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
LDLRAP1Q5SW96 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.02■□□□□ 0.8
LDLRAP1Q5SW96 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LDLRAP1Q5SW96 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
LDLRAP1Q5SW96 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.02■□□□□ 0.79
LDLRAP1Q5SW96 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
LDLRAP1Q5SW96 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
LDLRAP1Q5SW96 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC20.02■□□□□ 0.79
LDLRAP1Q5SW96 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
LDLRAP1Q5SW96 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
LDLRAP1Q5SW96 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LDLRAP1Q5SW96 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LDLRAP1Q5SW96 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LDLRAP1Q5SW96 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
LDLRAP1Q5SW96 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC20.01■□□□□ 0.79
LDLRAP1Q5SW96 AC083880.1-201ENST00000608266 535 ntBASIC20.01■□□□□ 0.79
LDLRAP1Q5SW96 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LDLRAP1Q5SW96 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC20.01■□□□□ 0.79
LDLRAP1Q5SW96 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
LDLRAP1Q5SW96 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms