Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC18.23■□□□□ 0.51
RNFT1Q5M7Z0 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC18.23■□□□□ 0.51
RNFT1Q5M7Z0 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
RNFT1Q5M7Z0 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
RNFT1Q5M7Z0 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RNFT1Q5M7Z0 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC18.23■□□□□ 0.51
RNFT1Q5M7Z0 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RNFT1Q5M7Z0 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC18.23■□□□□ 0.51
RNFT1Q5M7Z0 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RNFT1Q5M7Z0 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RNFT1Q5M7Z0 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RNFT1Q5M7Z0 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC18.23■□□□□ 0.51
RNFT1Q5M7Z0 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC18.23■□□□□ 0.51
RNFT1Q5M7Z0 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC18.23■□□□□ 0.51
RNFT1Q5M7Z0 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC18.23■□□□□ 0.51
RNFT1Q5M7Z0 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC18.23■□□□□ 0.51
RNFT1Q5M7Z0 AC233702.5-201ENST00000584107 538 ntBASIC18.23■□□□□ 0.51
RNFT1Q5M7Z0 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC18.23■□□□□ 0.51
RNFT1Q5M7Z0 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RNFT1Q5M7Z0 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
RNFT1Q5M7Z0 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
RNFT1Q5M7Z0 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
RNFT1Q5M7Z0 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
RNFT1Q5M7Z0 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RNFT1Q5M7Z0 LINC00565-201ENST00000562710 2331 ntBASIC18.22■□□□□ 0.51
RNFT1Q5M7Z0 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RNFT1Q5M7Z0 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC18.22■□□□□ 0.51
RNFT1Q5M7Z0 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
RNFT1Q5M7Z0 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RNFT1Q5M7Z0 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RNFT1Q5M7Z0 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
RNFT1Q5M7Z0 AC012618.2-201ENST00000428058 849 ntBASIC18.22■□□□□ 0.51
RNFT1Q5M7Z0 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC18.22■□□□□ 0.51
RNFT1Q5M7Z0 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RNFT1Q5M7Z0 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
RNFT1Q5M7Z0 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RNFT1Q5M7Z0 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.22■□□□□ 0.51
RNFT1Q5M7Z0 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RNFT1Q5M7Z0 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RNFT1Q5M7Z0 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RNFT1Q5M7Z0 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RNFT1Q5M7Z0 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RNFT1Q5M7Z0 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC18.21■□□□□ 0.51
RNFT1Q5M7Z0 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
RNFT1Q5M7Z0 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RNFT1Q5M7Z0 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC18.21■□□□□ 0.51
RNFT1Q5M7Z0 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
RNFT1Q5M7Z0 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
RNFT1Q5M7Z0 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
RNFT1Q5M7Z0 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC18.21■□□□□ 0.51
RNFT1Q5M7Z0 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC18.21■□□□□ 0.51
RNFT1Q5M7Z0 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC18.21■□□□□ 0.51
RNFT1Q5M7Z0 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RNFT1Q5M7Z0 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
RNFT1Q5M7Z0 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
RNFT1Q5M7Z0 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC18.21■□□□□ 0.51
RNFT1Q5M7Z0 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
RNFT1Q5M7Z0 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC18.2■□□□□ 0.5
RNFT1Q5M7Z0 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RNFT1Q5M7Z0 PTBP1P-201ENST00000554374 1601 ntBASIC18.2■□□□□ 0.5
RNFT1Q5M7Z0 ERF-202ENST00000440177 2032 ntTSL 2 BASIC18.2■□□□□ 0.5
RNFT1Q5M7Z0 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RNFT1Q5M7Z0 WWC2-AS2-201ENST00000578387 2183 ntBASIC18.2■□□□□ 0.5
RNFT1Q5M7Z0 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
RNFT1Q5M7Z0 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RNFT1Q5M7Z0 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC18.2■□□□□ 0.5
RNFT1Q5M7Z0 TSPY7P-201ENST00000431358 1114 ntBASIC18.2■□□□□ 0.5
RNFT1Q5M7Z0 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC18.2■□□□□ 0.5
RNFT1Q5M7Z0 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC18.2■□□□□ 0.5
RNFT1Q5M7Z0 Six3os1_6.1-201ENST00000620790 196 ntBASIC18.2■□□□□ 0.5
RNFT1Q5M7Z0 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC18.2■□□□□ 0.5
RNFT1Q5M7Z0 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC18.2■□□□□ 0.5
RNFT1Q5M7Z0 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC18.2■□□□□ 0.5
RNFT1Q5M7Z0 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC18.2■□□□□ 0.5
RNFT1Q5M7Z0 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RNFT1Q5M7Z0 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RNFT1Q5M7Z0 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
RNFT1Q5M7Z0 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
RNFT1Q5M7Z0 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RNFT1Q5M7Z0 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RNFT1Q5M7Z0 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
RNFT1Q5M7Z0 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RNFT1Q5M7Z0 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
RNFT1Q5M7Z0 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC18.19■□□□□ 0.5
RNFT1Q5M7Z0 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC18.19■□□□□ 0.5
RNFT1Q5M7Z0 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC18.19■□□□□ 0.5
RNFT1Q5M7Z0 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC18.19■□□□□ 0.5
RNFT1Q5M7Z0 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC18.19■□□□□ 0.5
RNFT1Q5M7Z0 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RNFT1Q5M7Z0 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
RNFT1Q5M7Z0 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC18.19■□□□□ 0.5
RNFT1Q5M7Z0 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC18.19■□□□□ 0.5
RNFT1Q5M7Z0 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC18.19■□□□□ 0.5
RNFT1Q5M7Z0 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
RNFT1Q5M7Z0 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC18.19■□□□□ 0.5
RNFT1Q5M7Z0 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC18.19■□□□□ 0.5
RNFT1Q5M7Z0 AC026310.3-201ENST00000625186 2373 ntBASIC18.19■□□□□ 0.5
RNFT1Q5M7Z0 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.19■□□□□ 0.5
RNFT1Q5M7Z0 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RNFT1Q5M7Z0 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms