Protein–RNA interactions for Protein: Q5H8C1

FREM1, FRAS1-related extracellular matrix protein 1, humanhuman

Predictions only

Length 2,179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM1Q5H8C1 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
FREM1Q5H8C1 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
FREM1Q5H8C1 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
FREM1Q5H8C1 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC17.78■□□□□ 0.44
FREM1Q5H8C1 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
FREM1Q5H8C1 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC17.78■□□□□ 0.44
FREM1Q5H8C1 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
FREM1Q5H8C1 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
FREM1Q5H8C1 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC17.78■□□□□ 0.44
FREM1Q5H8C1 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
FREM1Q5H8C1 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
FREM1Q5H8C1 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC17.78■□□□□ 0.44
FREM1Q5H8C1 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
FREM1Q5H8C1 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
FREM1Q5H8C1 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
FREM1Q5H8C1 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC17.78■□□□□ 0.44
FREM1Q5H8C1 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
FREM1Q5H8C1 AL391422.3-201ENST00000603791 2761 ntBASIC17.78■□□□□ 0.44
FREM1Q5H8C1 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
FREM1Q5H8C1 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC17.78■□□□□ 0.44
FREM1Q5H8C1 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC17.78■□□□□ 0.44
FREM1Q5H8C1 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC17.78■□□□□ 0.44
FREM1Q5H8C1 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC17.78■□□□□ 0.44
FREM1Q5H8C1 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
FREM1Q5H8C1 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
FREM1Q5H8C1 AC124283.5-201ENST00000624661 1809 ntBASIC17.77■□□□□ 0.44
FREM1Q5H8C1 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
FREM1Q5H8C1 FAM201B-201ENST00000458407 597 ntBASIC17.77■□□□□ 0.44
FREM1Q5H8C1 RPS2P52-201ENST00000469610 820 ntBASIC17.77■□□□□ 0.44
FREM1Q5H8C1 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC17.77■□□□□ 0.44
FREM1Q5H8C1 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
FREM1Q5H8C1 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
FREM1Q5H8C1 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
FREM1Q5H8C1 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
FREM1Q5H8C1 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
FREM1Q5H8C1 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
FREM1Q5H8C1 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC17.77■□□□□ 0.44
FREM1Q5H8C1 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
FREM1Q5H8C1 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC17.77■□□□□ 0.43
FREM1Q5H8C1 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC17.77■□□□□ 0.43
FREM1Q5H8C1 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC17.77■□□□□ 0.43
FREM1Q5H8C1 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
FREM1Q5H8C1 SMG8-203ENST00000578922 2178 ntBASIC17.76■□□□□ 0.43
FREM1Q5H8C1 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
FREM1Q5H8C1 MFF-205ENST00000354503 1085 ntTSL 2 BASIC17.76■□□□□ 0.43
FREM1Q5H8C1 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
FREM1Q5H8C1 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC17.76■□□□□ 0.43
FREM1Q5H8C1 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
FREM1Q5H8C1 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC17.76■□□□□ 0.43
FREM1Q5H8C1 SOX15-203ENST00000570788 1093 ntBASIC17.76■□□□□ 0.43
FREM1Q5H8C1 HLA-B-256ENST00000639848 1089 ntBASIC17.76■□□□□ 0.43
FREM1Q5H8C1 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
FREM1Q5H8C1 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
FREM1Q5H8C1 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
FREM1Q5H8C1 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
FREM1Q5H8C1 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
FREM1Q5H8C1 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
FREM1Q5H8C1 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
FREM1Q5H8C1 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
FREM1Q5H8C1 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
FREM1Q5H8C1 TREX2-204ENST00000370212 861 ntTSL 5 BASIC17.76■□□□□ 0.43
FREM1Q5H8C1 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
FREM1Q5H8C1 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC17.76■□□□□ 0.43
FREM1Q5H8C1 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
FREM1Q5H8C1 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC17.76■□□□□ 0.43
FREM1Q5H8C1 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
FREM1Q5H8C1 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
FREM1Q5H8C1 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
FREM1Q5H8C1 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC17.75■□□□□ 0.43
FREM1Q5H8C1 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC17.75■□□□□ 0.43
FREM1Q5H8C1 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
FREM1Q5H8C1 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
FREM1Q5H8C1 KRT17P3-201ENST00000420566 1262 ntBASIC17.75■□□□□ 0.43
FREM1Q5H8C1 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC17.75■□□□□ 0.43
FREM1Q5H8C1 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC17.75■□□□□ 0.43
FREM1Q5H8C1 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
FREM1Q5H8C1 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
FREM1Q5H8C1 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
FREM1Q5H8C1 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
FREM1Q5H8C1 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
FREM1Q5H8C1 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
FREM1Q5H8C1 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
FREM1Q5H8C1 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
FREM1Q5H8C1 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
FREM1Q5H8C1 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
FREM1Q5H8C1 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC17.74■□□□□ 0.43
FREM1Q5H8C1 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC17.74■□□□□ 0.43
FREM1Q5H8C1 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
FREM1Q5H8C1 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
FREM1Q5H8C1 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC17.74■□□□□ 0.43
FREM1Q5H8C1 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
FREM1Q5H8C1 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC17.74■□□□□ 0.43
FREM1Q5H8C1 IRX5-204ENST00000560154 879 ntTSL 5 BASIC17.74■□□□□ 0.43
FREM1Q5H8C1 AC005829.2-201ENST00000571422 1056 ntBASIC17.74■□□□□ 0.43
FREM1Q5H8C1 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
FREM1Q5H8C1 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
FREM1Q5H8C1 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
FREM1Q5H8C1 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
FREM1Q5H8C1 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
FREM1Q5H8C1 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms