Protein–RNA interactions for Protein: Q08949

DDC1, DNA damage checkpoint protein 1, yeastyeast

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
DDC1Q08949 RPL31AYDL075W 342 nt1.45□□□□□ -2.18
DDC1Q08949 ATP6Q0085 780 nt1.45□□□□□ -2.18
DDC1Q08949 PHS1YJL097W 654 nt1.45□□□□□ -2.18
DDC1Q08949 ABM1YJR108W 372 nt1.45□□□□□ -2.18
DDC1Q08949 YNL114CYNL114C 372 nt1.45□□□□□ -2.18
DDC1Q08949 FMP23YBR047W 528 nt1.45□□□□□ -2.18
DDC1Q08949 YPL182CYPL182C 384 nt1.45□□□□□ -2.18
DDC1Q08949 RLM1YPL089C 2031 nt1.44□□□□□ -2.18
DDC1Q08949 KCS1YDR017C 3153 nt1.44□□□□□ -2.18
DDC1Q08949 HKR1YDR420W 5409 nt1.44□□□□□ -2.18
DDC1Q08949 MCM22YJR135C 720 nt1.44□□□□□ -2.18
DDC1Q08949 TRX1YLR043C 312 nt1.44□□□□□ -2.18
DDC1Q08949 YAR047CYAR047C 321 nt1.44□□□□□ -2.18
DDC1Q08949 RPL26AYLR344W 384 nt1.44□□□□□ -2.18
DDC1Q08949 YBL073WYBL073W 312 nt1.44□□□□□ -2.18
DDC1Q08949 TOF2YKR010C 2316 nt1.44□□□□□ -2.18
DDC1Q08949 MON2YNL297C 4911 nt1.43□□□□□ -2.18
DDC1Q08949 YAP6YDR259C 1152 nt1.43□□□□□ -2.18
DDC1Q08949 YHR028W-AYHR028W-A 321 nt1.43□□□□□ -2.18
DDC1Q08949 PIP2YOR363C 2991 nt1.43□□□□□ -2.18
DDC1Q08949 YLR419WYLR419W 4308 nt1.42□□□□□ -2.18
DDC1Q08949 YDR008CYDR008C 351 nt1.42□□□□□ -2.18
DDC1Q08949 YGR265WYGR265W 411 nt1.42□□□□□ -2.18
DDC1Q08949 FYV8YGR196C 2454 nt1.42□□□□□ -2.18
DDC1Q08949 PCF11YDR228C 1881 nt1.41□□□□□ -2.18
DDC1Q08949 GIM4YEL003W 336 nt1.41□□□□□ -2.18
DDC1Q08949 tH(GUG)E1tH(GUG)E1 72 nt1.41□□□□□ -2.18
DDC1Q08949 tH(GUG)E2tH(GUG)E2 72 nt1.41□□□□□ -2.18
DDC1Q08949 tH(GUG)G1tH(GUG)G1 72 nt1.41□□□□□ -2.18
DDC1Q08949 tH(GUG)G2tH(GUG)G2 72 nt1.41□□□□□ -2.18
DDC1Q08949 tH(GUG)HtH(GUG)H 72 nt1.41□□□□□ -2.18
DDC1Q08949 tH(GUG)KtH(GUG)K 72 nt1.41□□□□□ -2.18
DDC1Q08949 tH(GUG)MtH(GUG)M 72 nt1.41□□□□□ -2.18
DDC1Q08949 TIM13YGR181W 318 nt1.41□□□□□ -2.18
DDC1Q08949 YHR175W-AYHR175W-A 150 nt1.41□□□□□ -2.18
DDC1Q08949 YJL020W-AYJL020W-A 258 nt1.41□□□□□ -2.18
DDC1Q08949 HIT1YJR055W 495 nt1.41□□□□□ -2.18
DDC1Q08949 PAU18YLL064C 363 nt1.41□□□□□ -2.18
DDC1Q08949 ISF1YMR081C 1017 nt1.41□□□□□ -2.18
DDC1Q08949 RPL9BYNL067W 576 nt1.41□□□□□ -2.18
DDC1Q08949 PAU6YNR076W 363 nt1.41□□□□□ -2.18
DDC1Q08949 YOR121CYOR121C 306 nt1.41□□□□□ -2.18
DDC1Q08949 YCL046WYCL046W 324 nt1.41□□□□□ -2.18
DDC1Q08949 CCH1YGR217W 6120 nt1.41□□□□□ -2.18
DDC1Q08949 SXM1YDR395W 2835 nt1.41□□□□□ -2.18
DDC1Q08949 CDC25YLR310C 4770 nt1.41□□□□□ -2.18
DDC1Q08949 OSH6YKR003W 1347 nt1.4□□□□□ -2.18
DDC1Q08949 SKI3YPR189W 4299 nt1.4□□□□□ -2.18
DDC1Q08949 MSH5YDL154W 2706 nt1.4□□□□□ -2.18
DDC1Q08949 FRK1YPL141C 2598 nt1.4□□□□□ -2.19
DDC1Q08949 HDA3YPR179C 1968 nt1.4□□□□□ -2.19
DDC1Q08949 SSK2YNR031C 4740 nt1.4□□□□□ -2.19
DDC1Q08949 HMI1YOL095C 2121 nt1.39□□□□□ -2.19
DDC1Q08949 tR(ACG)Q2tR(ACG)Q2 74 nt1.39□□□□□ -2.19
DDC1Q08949 PET127YOR017W 2403 nt1.39□□□□□ -2.19
DDC1Q08949 MAK10YEL053C 2202 nt1.39□□□□□ -2.19
DDC1Q08949 LAA1YJL207C 6045 nt1.38□□□□□ -2.19
DDC1Q08949 YBR012CYBR012C 420 nt1.38□□□□□ -2.19
DDC1Q08949 ZRG17YNR039C 1818 nt1.38□□□□□ -2.19
DDC1Q08949 SWI5YDR146C 2130 nt1.37□□□□□ -2.19
DDC1Q08949 PXA2YKL188C 2562 nt1.37□□□□□ -2.19
DDC1Q08949 tQ(UUG)E2tQ(UUG)E2 72 nt1.37□□□□□ -2.19
DDC1Q08949 YKL083WYKL083W 615 nt1.37□□□□□ -2.19
DDC1Q08949 YML003WYML003W 873 nt1.37□□□□□ -2.19
DDC1Q08949 AIM9YER080W 1884 nt1.37□□□□□ -2.19
DDC1Q08949 YGR130CYGR130C 2451 nt1.36□□□□□ -2.19
DDC1Q08949 YLR140WYLR140W 327 nt1.36□□□□□ -2.19
DDC1Q08949 SEC21YNL287W 2808 nt1.35□□□□□ -2.19
DDC1Q08949 RPS27AYKL156W 249 nt1.35□□□□□ -2.19
DDC1Q08949 YOR029WYOR029W 336 nt1.35□□□□□ -2.19
DDC1Q08949 HHT1YBR010W 411 nt1.35□□□□□ -2.19
DDC1Q08949 YDR003W-AYDR003W-A 123 nt1.34□□□□□ -2.19
DDC1Q08949 YHL041WYHL041W 450 nt1.34□□□□□ -2.19
DDC1Q08949 YMR141W-AYMR141W-A 225 nt1.34□□□□□ -2.19
DDC1Q08949 YPL229WYPL229W 621 nt1.34□□□□□ -2.19
DDC1Q08949 YGR035CYGR035C 351 nt1.33□□□□□ -2.2
DDC1Q08949 YHL046W-AYHL046W-A 327 nt1.33□□□□□ -2.2
DDC1Q08949 YLR146W-AYLR146W-A 189 nt1.33□□□□□ -2.2
DDC1Q08949 IRC23YOR044W 474 nt1.33□□□□□ -2.2
DDC1Q08949 PAC1YOR269W 1485 nt1.32□□□□□ -2.2
DDC1Q08949 SRP14YDL092W 441 nt1.32□□□□□ -2.2
DDC1Q08949 CYC7YEL039C 342 nt1.32□□□□□ -2.2
DDC1Q08949 YGR174W-AYGR174W-A 87 nt1.32□□□□□ -2.2
DDC1Q08949 YJL022WYJL022W 309 nt1.32□□□□□ -2.2
DDC1Q08949 YOP1YPR028W 543 nt1.32□□□□□ -2.2
DDC1Q08949 YJR003CYJR003C 1560 nt1.32□□□□□ -2.2
DDC1Q08949 BST1YFL025C 3090 nt1.31□□□□□ -2.2
DDC1Q08949 RTR1YER139C 681 nt1.31□□□□□ -2.2
DDC1Q08949 EMC5YIL027C 426 nt1.31□□□□□ -2.2
DDC1Q08949 tW(UCA)QtW(UCA)Q 74 nt1.31□□□□□ -2.2
DDC1Q08949 YAR053WYAR053W 297 nt1.31□□□□□ -2.2
DDC1Q08949 YPR016W-AYPR016W-A 261 nt1.31□□□□□ -2.2
DDC1Q08949 KAP122YGL016W 3246 nt1.31□□□□□ -2.2
DDC1Q08949 SPC98YNL126W 2541 nt1.31□□□□□ -2.2
DDC1Q08949 ALK1YGL021W 2283 nt1.31□□□□□ -2.2
DDC1Q08949 PBY1YBR094W 2262 nt1.31□□□□□ -2.2
DDC1Q08949 LYS14YDR034C 2373 nt1.3□□□□□ -2.2
DDC1Q08949 MLH3YPL164C 2148 nt1.3□□□□□ -2.2
DDC1Q08949 ZIP1YDR285W 2628 nt1.3□□□□□ -2.2
DDC1Q08949 COF1YLL050C 432 nt1.3□□□□□ -2.2
Retrieved 100 of 7,029 protein–RNA pairs in 33.7 ms