Protein–RNA interactions for Protein: Q00723

PRP38, Pre-mRNA-splicing factor 38, yeastyeast

Predicted RBP Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PRP38Q00723 SEY1YOR165W 2331 nt1.45□□□□□ -2.18
PRP38Q00723 HDA3YPR179C 1968 nt1.45□□□□□ -2.18
PRP38Q00723 CCH1YGR217W 6120 nt1.45□□□□□ -2.18
PRP38Q00723 HMRA1YCR097W 381 nt1.45□□□□□ -2.18
PRP38Q00723 YER137W-AYER137W-A 306 nt1.45□□□□□ -2.18
PRP38Q00723 FRK1YPL141C 2598 nt1.44□□□□□ -2.18
PRP38Q00723 YLR334CYLR334C 381 nt1.44□□□□□ -2.18
PRP38Q00723 ISF1YMR081C 1017 nt1.44□□□□□ -2.18
PRP38Q00723 YBL073WYBL073W 312 nt1.44□□□□□ -2.18
PRP38Q00723 CDC31YOR257W 486 nt1.44□□□□□ -2.18
PRP38Q00723 RKM1YPL208W 1752 nt1.44□□□□□ -2.18
PRP38Q00723 CTR9YOL145C 3234 nt1.44□□□□□ -2.18
PRP38Q00723 AIM9YER080W 1884 nt1.43□□□□□ -2.18
PRP38Q00723 tQ(UUG)E2tQ(UUG)E2 72 nt1.43□□□□□ -2.18
PRP38Q00723 ABM1YJR108W 372 nt1.43□□□□□ -2.18
PRP38Q00723 YKL083WYKL083W 615 nt1.43□□□□□ -2.18
PRP38Q00723 YLR146W-AYLR146W-A 189 nt1.43□□□□□ -2.18
PRP38Q00723 RLM1YPL089C 2031 nt1.42□□□□□ -2.18
PRP38Q00723 PXA2YKL188C 2562 nt1.42□□□□□ -2.18
PRP38Q00723 ATG31YDR022C 591 nt1.42□□□□□ -2.18
PRP38Q00723 YGR265WYGR265W 411 nt1.42□□□□□ -2.18
PRP38Q00723 PFD1YJL179W 330 nt1.42□□□□□ -2.18
PRP38Q00723 HHT1YBR010W 411 nt1.42□□□□□ -2.18
PRP38Q00723 YOR121CYOR121C 306 nt1.42□□□□□ -2.18
PRP38Q00723 YPL229WYPL229W 621 nt1.42□□□□□ -2.18
PRP38Q00723 YBR174CYBR174C 315 nt1.42□□□□□ -2.18
PRP38Q00723 ZRG17YNR039C 1818 nt1.42□□□□□ -2.18
PRP38Q00723 SXM1YDR395W 2835 nt1.42□□□□□ -2.18
PRP38Q00723 DCP2YNL118C 2913 nt1.42□□□□□ -2.18
PRP38Q00723 RPL31AYDL075W 342 nt1.41□□□□□ -2.18
PRP38Q00723 HIT1YJR055W 495 nt1.41□□□□□ -2.18
PRP38Q00723 YML003WYML003W 873 nt1.41□□□□□ -2.18
PRP38Q00723 YPL261CYPL261C 309 nt1.41□□□□□ -2.18
PRP38Q00723 MON2YNL297C 4911 nt1.41□□□□□ -2.18
PRP38Q00723 SPC110YDR356W 2835 nt1.41□□□□□ -2.18
PRP38Q00723 MAK10YEL053C 2202 nt1.4□□□□□ -2.18
PRP38Q00723 NOP53YPL146C 1368 nt1.4□□□□□ -2.19
PRP38Q00723 YDR003W-AYDR003W-A 123 nt1.4□□□□□ -2.19
PRP38Q00723 YGR174W-AYGR174W-A 87 nt1.4□□□□□ -2.19
PRP38Q00723 MSH3YCR092C 3057 nt1.4□□□□□ -2.19
PRP38Q00723 SWI6YLR182W 2412 nt1.39□□□□□ -2.19
PRP38Q00723 CTF4YPR135W 2784 nt1.39□□□□□ -2.19
PRP38Q00723 snR56snR56 88 nt1.39□□□□□ -2.19
PRP38Q00723 TBS1YBR150C 3285 nt1.39□□□□□ -2.19
PRP38Q00723 MSH5YDL154W 2706 nt1.39□□□□□ -2.19
PRP38Q00723 HMI1YOL095C 2121 nt1.39□□□□□ -2.19
PRP38Q00723 MDM20YOL076W 2391 nt1.39□□□□□ -2.19
PRP38Q00723 RTR1YER139C 681 nt1.38□□□□□ -2.19
PRP38Q00723 YIL059CYIL059C 366 nt1.38□□□□□ -2.19
PRP38Q00723 TRX1YLR043C 312 nt1.38□□□□□ -2.19
PRP38Q00723 YOP1YPR028W 543 nt1.38□□□□□ -2.19
PRP38Q00723 SKI3YPR189W 4299 nt1.38□□□□□ -2.19
PRP38Q00723 PET127YOR017W 2403 nt1.38□□□□□ -2.19
PRP38Q00723 EFR3YMR212C 2349 nt1.38□□□□□ -2.19
PRP38Q00723 ZIP1YDR285W 2628 nt1.37□□□□□ -2.19
PRP38Q00723 LYS14YDR034C 2373 nt1.37□□□□□ -2.19
PRP38Q00723 SRP14YDL092W 441 nt1.37□□□□□ -2.19
PRP38Q00723 CYC7YEL039C 342 nt1.37□□□□□ -2.19
PRP38Q00723 YHL041WYHL041W 450 nt1.37□□□□□ -2.19
PRP38Q00723 YLR419WYLR419W 4308 nt1.37□□□□□ -2.19
PRP38Q00723 POL5YEL055C 3069 nt1.36□□□□□ -2.19
PRP38Q00723 KCS1YDR017C 3153 nt1.36□□□□□ -2.19
PRP38Q00723 YHR175W-AYHR175W-A 150 nt1.36□□□□□ -2.19
PRP38Q00723 YOR029WYOR029W 336 nt1.36□□□□□ -2.19
PRP38Q00723 PIK1YNL267W 3201 nt1.35□□□□□ -2.19
PRP38Q00723 RFX1YLR176C 2436 nt1.35□□□□□ -2.19
PRP38Q00723 YMR141W-AYMR141W-A 225 nt1.35□□□□□ -2.19
PRP38Q00723 IRC23YOR044W 474 nt1.35□□□□□ -2.19
PRP38Q00723 YJR003CYJR003C 1560 nt1.34□□□□□ -2.19
PRP38Q00723 GIM4YEL003W 336 nt1.34□□□□□ -2.19
PRP38Q00723 YGR035CYGR035C 351 nt1.34□□□□□ -2.19
PRP38Q00723 YBR012CYBR012C 420 nt1.34□□□□□ -2.19
PRP38Q00723 MLH3YPL164C 2148 nt1.34□□□□□ -2.2
PRP38Q00723 FYV8YGR196C 2454 nt1.33□□□□□ -2.2
PRP38Q00723 SPC98YNL126W 2541 nt1.33□□□□□ -2.2
PRP38Q00723 PAC1YOR269W 1485 nt1.33□□□□□ -2.2
PRP38Q00723 ATP6Q0085 780 nt1.33□□□□□ -2.2
PRP38Q00723 YHL046W-AYHL046W-A 327 nt1.33□□□□□ -2.2
PRP38Q00723 UPS1YLR193C 528 nt1.33□□□□□ -2.2
PRP38Q00723 NUT2YPR168W 474 nt1.33□□□□□ -2.2
PRP38Q00723 SEC21YNL287W 2808 nt1.33□□□□□ -2.2
PRP38Q00723 YAR053WYAR053W 297 nt1.32□□□□□ -2.2
PRP38Q00723 YLL032CYLL032C 2478 nt1.31□□□□□ -2.2
PRP38Q00723 tR(ACG)Q2tR(ACG)Q2 74 nt1.31□□□□□ -2.2
PRP38Q00723 MRPL31YKL138C 396 nt1.31□□□□□ -2.2
PRP38Q00723 YAL063C-AYAL063C-A 291 nt1.31□□□□□ -2.2
PRP38Q00723 YOR072W-AYOR072W-A 249 nt1.31□□□□□ -2.2
PRP38Q00723 SLY1YDR189W 2001 nt1.31□□□□□ -2.2
PRP38Q00723 BST1YFL025C 3090 nt1.31□□□□□ -2.2
PRP38Q00723 PAU2YEL049W 363 nt1.3□□□□□ -2.2
PRP38Q00723 YLR140WYLR140W 327 nt1.3□□□□□ -2.2
PRP38Q00723 CDC25YLR310C 4770 nt1.3□□□□□ -2.2
PRP38Q00723 DGR2YKL121W 2559 nt1.3□□□□□ -2.2
PRP38Q00723 LAA1YJL207C 6045 nt1.3□□□□□ -2.2
PRP38Q00723 HKR1YDR420W 5409 nt1.29□□□□□ -2.2
PRP38Q00723 MUK1YPL070W 1839 nt1.29□□□□□ -2.2
PRP38Q00723 tH(GUG)E1tH(GUG)E1 72 nt1.29□□□□□ -2.2
PRP38Q00723 tH(GUG)E2tH(GUG)E2 72 nt1.29□□□□□ -2.2
PRP38Q00723 tH(GUG)G1tH(GUG)G1 72 nt1.29□□□□□ -2.2
PRP38Q00723 tH(GUG)G2tH(GUG)G2 72 nt1.29□□□□□ -2.2
Retrieved 100 of 7,029 protein–RNA pairs in 18.6 ms