Protein–RNA interactions for Protein: P53950

VAC7, Vacuolar segregation protein 7, yeastyeast

Predictions only

Length 1,165 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VAC7P53950 CCH1YGR217W 6120 nt1.47□□□□□ -2.17
VAC7P53950 HKR1YDR420W 5409 nt1.47□□□□□ -2.17
VAC7P53950 PCF11YDR228C 1881 nt1.46□□□□□ -2.18
VAC7P53950 FRK1YPL141C 2598 nt1.46□□□□□ -2.18
VAC7P53950 YHR028W-AYHR028W-A 321 nt1.46□□□□□ -2.18
VAC7P53950 YAL068W-AYAL068W-A 255 nt1.46□□□□□ -2.18
VAC7P53950 PAU18YLL064C 363 nt1.46□□□□□ -2.18
VAC7P53950 BSC3YLR465C 309 nt1.46□□□□□ -2.18
VAC7P53950 PAU6YNR076W 363 nt1.46□□□□□ -2.18
VAC7P53950 CTR9YOL145C 3234 nt1.45□□□□□ -2.18
VAC7P53950 OSH6YKR003W 1347 nt1.45□□□□□ -2.18
VAC7P53950 HDA3YPR179C 1968 nt1.45□□□□□ -2.18
VAC7P53950 MSC6YOR354C 2079 nt1.45□□□□□ -2.18
VAC7P53950 YDR008CYDR008C 351 nt1.45□□□□□ -2.18
VAC7P53950 YDR118W-AYDR118W-A 117 nt1.45□□□□□ -2.18
VAC7P53950 tQ(UUG)E2tQ(UUG)E2 72 nt1.45□□□□□ -2.18
VAC7P53950 YJL020W-AYJL020W-A 258 nt1.45□□□□□ -2.18
VAC7P53950 IRR1YIL026C 3453 nt1.45□□□□□ -2.18
VAC7P53950 MON2YNL297C 4911 nt1.44□□□□□ -2.18
VAC7P53950 YAP6YDR259C 1152 nt1.44□□□□□ -2.18
VAC7P53950 YKL083WYKL083W 615 nt1.44□□□□□ -2.18
VAC7P53950 RPL26AYLR344W 384 nt1.44□□□□□ -2.18
VAC7P53950 YBL073WYBL073W 312 nt1.44□□□□□ -2.18
VAC7P53950 MAK10YEL053C 2202 nt1.43□□□□□ -2.18
VAC7P53950 YER137W-AYER137W-A 306 nt1.43□□□□□ -2.18
VAC7P53950 YLR146W-AYLR146W-A 189 nt1.43□□□□□ -2.18
VAC7P53950 AIM9YER080W 1884 nt1.43□□□□□ -2.18
VAC7P53950 PMD1YER132C 5262 nt1.43□□□□□ -2.18
VAC7P53950 RLM1YPL089C 2031 nt1.42□□□□□ -2.18
VAC7P53950 MDM20YOL076W 2391 nt1.42□□□□□ -2.18
VAC7P53950 HMI1YOL095C 2121 nt1.42□□□□□ -2.18
VAC7P53950 YLR419WYLR419W 4308 nt1.42□□□□□ -2.18
VAC7P53950 SWI6YLR182W 2412 nt1.42□□□□□ -2.18
VAC7P53950 LAA1YJL207C 6045 nt1.42□□□□□ -2.18
VAC7P53950 SXM1YDR395W 2835 nt1.41□□□□□ -2.18
VAC7P53950 ZRG17YNR039C 1818 nt1.41□□□□□ -2.18
VAC7P53950 YGR174W-AYGR174W-A 87 nt1.41□□□□□ -2.18
VAC7P53950 YGR265WYGR265W 411 nt1.41□□□□□ -2.18
VAC7P53950 TRX1YLR043C 312 nt1.41□□□□□ -2.18
VAC7P53950 YLR334CYLR334C 381 nt1.41□□□□□ -2.18
VAC7P53950 ISF1YMR081C 1017 nt1.41□□□□□ -2.18
VAC7P53950 HHT1YBR010W 411 nt1.41□□□□□ -2.18
VAC7P53950 YPL229WYPL229W 621 nt1.41□□□□□ -2.18
VAC7P53950 YPR012WYPR012W 255 nt1.41□□□□□ -2.18
VAC7P53950 NOP53YPL146C 1368 nt1.41□□□□□ -2.18
VAC7P53950 PXA2YKL188C 2562 nt1.41□□□□□ -2.18
VAC7P53950 HMRA1YCR097W 381 nt1.4□□□□□ -2.19
VAC7P53950 HIT1YJR055W 495 nt1.4□□□□□ -2.19
VAC7P53950 YOR121CYOR121C 306 nt1.4□□□□□ -2.19
VAC7P53950 ZIP1YDR285W 2628 nt1.39□□□□□ -2.19
VAC7P53950 EFR3YMR212C 2349 nt1.39□□□□□ -2.19
VAC7P53950 SRP14YDL092W 441 nt1.39□□□□□ -2.19
VAC7P53950 YDR003W-AYDR003W-A 123 nt1.39□□□□□ -2.19
VAC7P53950 ABM1YJR108W 372 nt1.39□□□□□ -2.19
VAC7P53950 YLR140WYLR140W 327 nt1.39□□□□□ -2.19
VAC7P53950 YPL261CYPL261C 309 nt1.39□□□□□ -2.19
VAC7P53950 PIK1YNL267W 3201 nt1.39□□□□□ -2.19
VAC7P53950 SSK2YNR031C 4740 nt1.39□□□□□ -2.19
VAC7P53950 STF2YGR008C 255 nt1.38□□□□□ -2.19
VAC7P53950 YIL059CYIL059C 366 nt1.38□□□□□ -2.19
VAC7P53950 YGR130CYGR130C 2451 nt1.38□□□□□ -2.19
VAC7P53950 MSH5YDL154W 2706 nt1.37□□□□□ -2.19
VAC7P53950 snR56snR56 88 nt1.37□□□□□ -2.19
VAC7P53950 ATG31YDR022C 591 nt1.37□□□□□ -2.19
VAC7P53950 CYC7YEL039C 342 nt1.37□□□□□ -2.19
VAC7P53950 YML003WYML003W 873 nt1.37□□□□□ -2.19
VAC7P53950 HUG1YML058W-A 207 nt1.37□□□□□ -2.19
VAC7P53950 YOP1YPR028W 543 nt1.37□□□□□ -2.19
VAC7P53950 SKI3YPR189W 4299 nt1.37□□□□□ -2.19
VAC7P53950 LYS14YDR034C 2373 nt1.36□□□□□ -2.19
VAC7P53950 SPC98YNL126W 2541 nt1.36□□□□□ -2.19
VAC7P53950 MAD1YGL086W 2250 nt1.36□□□□□ -2.19
VAC7P53950 CDC25YLR310C 4770 nt1.36□□□□□ -2.19
VAC7P53950 RTR1YER139C 681 nt1.36□□□□□ -2.19
VAC7P53950 YHL041WYHL041W 450 nt1.36□□□□□ -2.19
VAC7P53950 tH(GUG)E1tH(GUG)E1 72 nt1.35□□□□□ -2.19
VAC7P53950 tH(GUG)E2tH(GUG)E2 72 nt1.35□□□□□ -2.19
VAC7P53950 tH(GUG)G1tH(GUG)G1 72 nt1.35□□□□□ -2.19
VAC7P53950 tH(GUG)G2tH(GUG)G2 72 nt1.35□□□□□ -2.19
VAC7P53950 tH(GUG)HtH(GUG)H 72 nt1.35□□□□□ -2.19
VAC7P53950 tH(GUG)KtH(GUG)K 72 nt1.35□□□□□ -2.19
VAC7P53950 tH(GUG)MtH(GUG)M 72 nt1.35□□□□□ -2.19
VAC7P53950 YOR029WYOR029W 336 nt1.35□□□□□ -2.19
VAC7P53950 MLH3YPL164C 2148 nt1.35□□□□□ -2.19
VAC7P53950 RFX1YLR176C 2436 nt1.34□□□□□ -2.19
VAC7P53950 BST1YFL025C 3090 nt1.34□□□□□ -2.2
VAC7P53950 AHC1YOR023C 1701 nt1.34□□□□□ -2.2
VAC7P53950 SEC21YNL287W 2808 nt1.34□□□□□ -2.2
VAC7P53950 MSN5YDR335W 3675 nt1.34□□□□□ -2.2
VAC7P53950 SLY1YDR189W 2001 nt1.33□□□□□ -2.2
VAC7P53950 YHR175W-AYHR175W-A 150 nt1.33□□□□□ -2.2
VAC7P53950 YMR141W-AYMR141W-A 225 nt1.33□□□□□ -2.2
VAC7P53950 IRC23YOR044W 474 nt1.33□□□□□ -2.2
VAC7P53950 IML1YJR138W 4755 nt1.33□□□□□ -2.2
VAC7P53950 YJR003CYJR003C 1560 nt1.33□□□□□ -2.2
VAC7P53950 PBY1YBR094W 2262 nt1.32□□□□□ -2.2
VAC7P53950 PAC1YOR269W 1485 nt1.32□□□□□ -2.2
VAC7P53950 GIM4YEL003W 336 nt1.32□□□□□ -2.2
VAC7P53950 MRPL31YKL138C 396 nt1.32□□□□□ -2.2
VAC7P53950 UPS1YLR193C 528 nt1.32□□□□□ -2.2
Retrieved 100 of 7,029 protein–RNA pairs in 26.8 ms