Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC17.84■□□□□ 0.45
SRP9P49458 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SRP9P49458 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SRP9P49458 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SRP9P49458 DBI-210ENST00000542275 757 ntTSL 5 BASIC17.84■□□□□ 0.45
SRP9P49458 KRT18P61-201ENST00000585825 1298 ntBASIC17.84■□□□□ 0.45
SRP9P49458 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.84■□□□□ 0.45
SRP9P49458 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SRP9P49458 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SRP9P49458 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SRP9P49458 BID-203ENST00000399765 1879 ntTSL 2 BASIC17.84■□□□□ 0.45
SRP9P49458 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC17.84■□□□□ 0.45
SRP9P49458 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SRP9P49458 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC17.84■□□□□ 0.45
SRP9P49458 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SRP9P49458 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SRP9P49458 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC17.83■□□□□ 0.45
SRP9P49458 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
SRP9P49458 STX5-203ENST00000394690 1568 ntTSL 5 BASIC17.83■□□□□ 0.45
SRP9P49458 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SRP9P49458 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.45
SRP9P49458 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC17.83■□□□□ 0.45
SRP9P49458 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SRP9P49458 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
SRP9P49458 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SRP9P49458 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC17.83■□□□□ 0.44
SRP9P49458 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC17.83■□□□□ 0.44
SRP9P49458 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC17.83■□□□□ 0.44
SRP9P49458 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SRP9P49458 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC17.83■□□□□ 0.44
SRP9P49458 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SRP9P49458 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
SRP9P49458 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
SRP9P49458 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SRP9P49458 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SRP9P49458 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
SRP9P49458 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SRP9P49458 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC17.82■□□□□ 0.44
SRP9P49458 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC17.82■□□□□ 0.44
SRP9P49458 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SRP9P49458 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
SRP9P49458 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SRP9P49458 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC17.82■□□□□ 0.44
SRP9P49458 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
SRP9P49458 STX7-201ENST00000367937 1090 ntTSL 5 BASIC17.82■□□□□ 0.44
SRP9P49458 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
SRP9P49458 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SRP9P49458 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC17.82■□□□□ 0.44
SRP9P49458 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SRP9P49458 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SRP9P49458 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC17.82■□□□□ 0.44
SRP9P49458 AC022517.1-201ENST00000592429 346 ntBASIC17.82■□□□□ 0.44
SRP9P49458 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SRP9P49458 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SRP9P49458 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC17.82■□□□□ 0.44
SRP9P49458 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC17.82■□□□□ 0.44
SRP9P49458 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
SRP9P49458 AP000974.1-201ENST00000623909 2387 ntBASIC17.82■□□□□ 0.44
SRP9P49458 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SRP9P49458 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC17.82■□□□□ 0.44
SRP9P49458 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SRP9P49458 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC17.82■□□□□ 0.44
SRP9P49458 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SRP9P49458 KRT16P2-201ENST00000414673 1423 ntBASIC17.81■□□□□ 0.44
SRP9P49458 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SRP9P49458 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SRP9P49458 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SRP9P49458 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SRP9P49458 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SRP9P49458 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
SRP9P49458 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC17.81■□□□□ 0.44
SRP9P49458 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC17.81■□□□□ 0.44
SRP9P49458 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC17.81■□□□□ 0.44
SRP9P49458 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
SRP9P49458 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SRP9P49458 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
SRP9P49458 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SRP9P49458 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SRP9P49458 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SRP9P49458 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC17.8■□□□□ 0.44
SRP9P49458 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SRP9P49458 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
SRP9P49458 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SRP9P49458 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
SRP9P49458 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
SRP9P49458 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SRP9P49458 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.8■□□□□ 0.44
SRP9P49458 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SRP9P49458 NAA20-201ENST00000310450 920 ntTSL 2 BASIC17.8■□□□□ 0.44
SRP9P49458 HSCB-202ENST00000398941 955 ntTSL 2 BASIC17.8■□□□□ 0.44
SRP9P49458 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
SRP9P49458 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC17.8■□□□□ 0.44
SRP9P49458 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SRP9P49458 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC17.8■□□□□ 0.44
SRP9P49458 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
SRP9P49458 AC004408.2-201ENST00000623613 2777 ntBASIC17.8■□□□□ 0.44
SRP9P49458 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SRP9P49458 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SRP9P49458 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
SRP9P49458 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms