Protein–RNA interactions for Protein: P47061

VPS53, Vacuolar protein sorting-associated protein 53, yeastyeast

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS53P47061 snR48snR48 113 nt2.83□□□□□ -1.96
VPS53P47061 AXL1YPR122W 3627 nt2.83□□□□□ -1.96
VPS53P47061 TAE2YPL009C 3117 nt2.83□□□□□ -1.96
VPS53P47061 SPO22YIL073C 2928 nt2.82□□□□□ -1.96
VPS53P47061 ESC1YMR219W 4977 nt2.82□□□□□ -1.96
VPS53P47061 SMY1YKL079W 1971 nt2.82□□□□□ -1.96
VPS53P47061 STB4YMR019W 2850 nt2.82□□□□□ -1.96
VPS53P47061 SGF11YPL047W 300 nt2.82□□□□□ -1.96
VPS53P47061 YEL043WYEL043W 2871 nt2.82□□□□□ -1.96
VPS53P47061 LRE1YCL051W 1752 nt2.82□□□□□ -1.96
VPS53P47061 SEC26YDR238C 2922 nt2.81□□□□□ -1.96
VPS53P47061 SDC25YLL016W 3147 nt2.81□□□□□ -1.96
VPS53P47061 YDR209CYDR209C 414 nt2.81□□□□□ -1.96
VPS53P47061 YNL114CYNL114C 372 nt2.81□□□□□ -1.96
VPS53P47061 YBR277CYBR277C 402 nt2.81□□□□□ -1.96
VPS53P47061 snR52snR52 92 nt2.81□□□□□ -1.96
VPS53P47061 YIL080WYIL080W 4722 nt2.8□□□□□ -1.96
VPS53P47061 PDR11YIL013C 4236 nt2.8□□□□□ -1.96
VPS53P47061 VPS16YPL045W 2397 nt2.8□□□□□ -1.96
VPS53P47061 SWA2YDR320C 2007 nt2.8□□□□□ -1.96
VPS53P47061 RIC1YLR039C 3171 nt2.79□□□□□ -1.96
VPS53P47061 ACB1YGR037C 264 nt2.79□□□□□ -1.96
VPS53P47061 RPL42BYHR141C 321 nt2.79□□□□□ -1.96
VPS53P47061 RPL42AYNL162W 321 nt2.79□□□□□ -1.96
VPS53P47061 RPH1YER169W 2391 nt2.79□□□□□ -1.96
VPS53P47061 snR72snR72 98 nt2.78□□□□□ -1.96
VPS53P47061 VTC1YER072W 390 nt2.78□□□□□ -1.96
VPS53P47061 SNF5YBR289W 2718 nt2.77□□□□□ -1.97
VPS53P47061 SNC1YAL030W 354 nt2.77□□□□□ -1.97
VPS53P47061 CRS5YOR031W 210 nt2.77□□□□□ -1.97
VPS53P47061 AFI1YOR129C 2682 nt2.76□□□□□ -1.97
VPS53P47061 SWR1YDR334W 4545 nt2.76□□□□□ -1.97
VPS53P47061 SCH9YHR205W 2475 nt2.76□□□□□ -1.97
VPS53P47061 KAP123YER110C 3342 nt2.76□□□□□ -1.97
VPS53P47061 RPS27BYHR021C 249 nt2.76□□□□□ -1.97
VPS53P47061 YOR381W-AYOR381W-A 168 nt2.76□□□□□ -1.97
VPS53P47061 CLN3YAL040C 1743 nt2.76□□□□□ -1.97
VPS53P47061 YKU80YMR106C 1890 nt2.75□□□□□ -1.97
VPS53P47061 CUL3YGR003W 2235 nt2.75□□□□□ -1.97
VPS53P47061 VMR1YHL035C 4779 nt2.75□□□□□ -1.97
VPS53P47061 RPB10YOR210W 213 nt2.75□□□□□ -1.97
VPS53P47061 SCP160YJL080C 3669 nt2.75□□□□□ -1.97
VPS53P47061 SWI6YLR182W 2412 nt2.74□□□□□ -1.97
VPS53P47061 NIP100YPL174C 2607 nt2.74□□□□□ -1.97
VPS53P47061 RFX1YLR176C 2436 nt2.74□□□□□ -1.97
VPS53P47061 CRM1YGR218W 3255 nt2.73□□□□□ -1.97
VPS53P47061 PDR1YGL013C 3207 nt2.73□□□□□ -1.97
VPS53P47061 ULI1YFR026C 510 nt2.72□□□□□ -1.97
VPS53P47061 YOR218CYOR218C 420 nt2.72□□□□□ -1.97
VPS53P47061 IRR1YIL026C 3453 nt2.72□□□□□ -1.97
VPS53P47061 MNL2YLR057W 2550 nt2.72□□□□□ -1.97
VPS53P47061 SPC98YNL126W 2541 nt2.72□□□□□ -1.97
VPS53P47061 ECM12YHR021W-A 456 nt2.71□□□□□ -1.98
VPS53P47061 YOR394C-AYOR394C-A 168 nt2.71□□□□□ -1.98
VPS53P47061 AMS1YGL156W 3252 nt2.71□□□□□ -1.98
VPS53P47061 GIS1YDR096W 2685 nt2.71□□□□□ -1.98
VPS53P47061 APL5YPL195W 2799 nt2.71□□□□□ -1.98
VPS53P47061 ISW1YBR245C 3390 nt2.7□□□□□ -1.98
VPS53P47061 MRD1YPR112C 2664 nt2.7□□□□□ -1.98
VPS53P47061 SPO75YLL005C 2607 nt2.7□□□□□ -1.98
VPS53P47061 SWI5YDR146C 2130 nt2.7□□□□□ -1.98
VPS53P47061 YHR073W-AYHR073W-A 177 nt2.7□□□□□ -1.98
VPS53P47061 RRP6YOR001W 2202 nt2.7□□□□□ -1.98
VPS53P47061 INP51YIL002C 2841 nt2.7□□□□□ -1.98
VPS53P47061 BNR1YIL159W 4128 nt2.7□□□□□ -1.98
VPS53P47061 TOP2YNL088W 4287 nt2.69□□□□□ -1.98
VPS53P47061 INP53YOR109W 3324 nt2.69□□□□□ -1.98
VPS53P47061 YGR050CYGR050C 357 nt2.69□□□□□ -1.98
VPS53P47061 CBF2YGR140W 2871 nt2.69□□□□□ -1.98
VPS53P47061 MLH1YMR167W 2310 nt2.69□□□□□ -1.98
VPS53P47061 SET2YJL168C 2202 nt2.68□□□□□ -1.98
VPS53P47061 YOR161W-BYOR161W-B 261 nt2.68□□□□□ -1.98
VPS53P47061 LYS14YDR034C 2373 nt2.68□□□□□ -1.98
VPS53P47061 MGM1YOR211C 2646 nt2.68□□□□□ -1.98
VPS53P47061 SMY2YBR172C 2223 nt2.68□□□□□ -1.98
VPS53P47061 PAU8YAL068C 363 nt2.67□□□□□ -1.98
VPS53P47061 PAU18YLL064C 363 nt2.67□□□□□ -1.98
VPS53P47061 RPS29AYLR388W 171 nt2.67□□□□□ -1.98
VPS53P47061 PAU6YNR076W 363 nt2.67□□□□□ -1.98
VPS53P47061 PAU20YOL161C 363 nt2.67□□□□□ -1.98
VPS53P47061 FAR11YNL127W 2862 nt2.67□□□□□ -1.98
VPS53P47061 SLY1YDR189W 2001 nt2.67□□□□□ -1.98
VPS53P47061 CDC53YDL132W 2448 nt2.67□□□□□ -1.98
VPS53P47061 YDR239CYDR239C 2364 nt2.66□□□□□ -1.98
VPS53P47061 MCM10YIL150C 1716 nt2.66□□□□□ -1.98
VPS53P47061 YHR071C-AYHR071C-A 321 nt2.66□□□□□ -1.98
VPS53P47061 YBL012CYBL012C 402 nt2.66□□□□□ -1.98
VPS53P47061 YBL053WYBL053W 375 nt2.66□□□□□ -1.98
VPS53P47061 TOR1YJR066W 7413 nt2.66□□□□□ -1.98
VPS53P47061 SLM1YIL105C 2061 nt2.65□□□□□ -1.98
VPS53P47061 HOS4YIL112W 3252 nt2.65□□□□□ -1.99
VPS53P47061 PMP1YCR024C-A 123 nt2.65□□□□□ -1.99
VPS53P47061 YOR055WYOR055W 435 nt2.65□□□□□ -1.99
VPS53P47061 YOR345CYOR345C 351 nt2.65□□□□□ -1.99
VPS53P47061 STH1YIL126W 4080 nt2.64□□□□□ -1.99
VPS53P47061 SPO21YOL091W 1830 nt2.64□□□□□ -1.99
VPS53P47061 UBP15YMR304W 3693 nt2.64□□□□□ -1.99
VPS53P47061 YCR043CYCR043C 384 nt2.64□□□□□ -1.99
VPS53P47061 SRP14YDL092W 441 nt2.64□□□□□ -1.99
VPS53P47061 YDR182W-AYDR182W-A 204 nt2.64□□□□□ -1.99
Retrieved 100 of 7,029 protein–RNA pairs in 39.8 ms