Protein–RNA interactions for Protein: P38606

ATP6V1A, V-type proton ATPase catalytic subunit A, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1AP38606 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
ATP6V1AP38606 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC25.86■■□□□ 1.73
ATP6V1AP38606 MIR2861-201ENST00000636310 90 ntBASIC25.86■■□□□ 1.73
ATP6V1AP38606 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
ATP6V1AP38606 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC25.86■■□□□ 1.73
ATP6V1AP38606 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
ATP6V1AP38606 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
ATP6V1AP38606 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
ATP6V1AP38606 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC25.85■■□□□ 1.73
ATP6V1AP38606 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
ATP6V1AP38606 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC25.85■■□□□ 1.73
ATP6V1AP38606 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
ATP6V1AP38606 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC25.85■■□□□ 1.73
ATP6V1AP38606 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC25.85■■□□□ 1.73
ATP6V1AP38606 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC25.85■■□□□ 1.73
ATP6V1AP38606 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
ATP6V1AP38606 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
ATP6V1AP38606 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC25.85■■□□□ 1.73
ATP6V1AP38606 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
ATP6V1AP38606 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
ATP6V1AP38606 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
ATP6V1AP38606 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC25.85■■□□□ 1.73
ATP6V1AP38606 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
ATP6V1AP38606 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
ATP6V1AP38606 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
ATP6V1AP38606 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
ATP6V1AP38606 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC25.84■■□□□ 1.73
ATP6V1AP38606 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC25.84■■□□□ 1.73
ATP6V1AP38606 AC113347.1-201ENST00000413321 391 ntBASIC25.84■■□□□ 1.73
ATP6V1AP38606 AL390955.1-201ENST00000428694 934 ntBASIC25.84■■□□□ 1.73
ATP6V1AP38606 KRT18P57-201ENST00000443599 1254 ntBASIC25.84■■□□□ 1.73
ATP6V1AP38606 DUT-205ENST00000558813 769 ntTSL 2 BASIC25.84■■□□□ 1.73
ATP6V1AP38606 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC25.84■■□□□ 1.73
ATP6V1AP38606 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC25.84■■□□□ 1.73
ATP6V1AP38606 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC25.84■■□□□ 1.73
ATP6V1AP38606 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC25.84■■□□□ 1.73
ATP6V1AP38606 CYP2D8P-201ENST00000433633 1490 ntBASIC25.84■■□□□ 1.73
ATP6V1AP38606 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
ATP6V1AP38606 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC25.83■■□□□ 1.73
ATP6V1AP38606 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
ATP6V1AP38606 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
ATP6V1AP38606 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC25.83■■□□□ 1.73
ATP6V1AP38606 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC25.83■■□□□ 1.73
ATP6V1AP38606 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC25.83■■□□□ 1.73
ATP6V1AP38606 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
ATP6V1AP38606 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC25.83■■□□□ 1.73
ATP6V1AP38606 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC25.83■■□□□ 1.73
ATP6V1AP38606 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC25.83■■□□□ 1.73
ATP6V1AP38606 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
ATP6V1AP38606 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC25.83■■□□□ 1.73
ATP6V1AP38606 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC25.83■■□□□ 1.73
ATP6V1AP38606 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC25.83■■□□□ 1.73
ATP6V1AP38606 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
ATP6V1AP38606 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC25.83■■□□□ 1.72
ATP6V1AP38606 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
ATP6V1AP38606 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
ATP6V1AP38606 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
ATP6V1AP38606 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
ATP6V1AP38606 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
ATP6V1AP38606 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
ATP6V1AP38606 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC25.82■■□□□ 1.72
ATP6V1AP38606 CR392000.1-201ENST00000624770 1228 ntBASIC25.82■■□□□ 1.72
ATP6V1AP38606 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
ATP6V1AP38606 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC25.82■■□□□ 1.72
ATP6V1AP38606 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC25.82■■□□□ 1.72
ATP6V1AP38606 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
ATP6V1AP38606 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
ATP6V1AP38606 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC25.82■■□□□ 1.72
ATP6V1AP38606 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
ATP6V1AP38606 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC25.81■■□□□ 1.72
ATP6V1AP38606 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC25.81■■□□□ 1.72
ATP6V1AP38606 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC25.81■■□□□ 1.72
ATP6V1AP38606 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC25.81■■□□□ 1.72
ATP6V1AP38606 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC25.81■■□□□ 1.72
ATP6V1AP38606 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC25.81■■□□□ 1.72
ATP6V1AP38606 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
ATP6V1AP38606 TPM1-226ENST00000560959 925 ntTSL 2 BASIC25.81■■□□□ 1.72
ATP6V1AP38606 NAPSB-206ENST00000562112 1266 ntBASIC25.81■■□□□ 1.72
ATP6V1AP38606 RMI2-205ENST00000576027 818 ntTSL 2 BASIC25.81■■□□□ 1.72
ATP6V1AP38606 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
ATP6V1AP38606 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
ATP6V1AP38606 TUB-203ENST00000534099 1759 ntTSL 2 BASIC25.81■■□□□ 1.72
ATP6V1AP38606 PARN-205ENST00000539279 1557 ntTSL 2 BASIC25.81■■□□□ 1.72
ATP6V1AP38606 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
ATP6V1AP38606 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
ATP6V1AP38606 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
ATP6V1AP38606 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC25.8■■□□□ 1.72
ATP6V1AP38606 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC25.8■■□□□ 1.72
ATP6V1AP38606 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC25.8■■□□□ 1.72
ATP6V1AP38606 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC25.8■■□□□ 1.72
ATP6V1AP38606 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC25.8■■□□□ 1.72
ATP6V1AP38606 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC25.8■■□□□ 1.72
ATP6V1AP38606 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC25.8■■□□□ 1.72
ATP6V1AP38606 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
ATP6V1AP38606 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
ATP6V1AP38606 AC233723.2-201ENST00000623798 2106 ntBASIC25.79■■□□□ 1.72
ATP6V1AP38606 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC25.79■■□□□ 1.72
ATP6V1AP38606 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
ATP6V1AP38606 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC25.79■■□□□ 1.72
ATP6V1AP38606 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC25.79■■□□□ 1.72
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms