Protein–RNA interactions for Protein: P35558

PCK1, Phosphoenolpyruvate carboxykinase, cytosolic [GTP], humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCK1P35558 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PCK1P35558 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
PCK1P35558 METTL26-203ENST00000397664 604 ntTSL 2 BASIC21.2■□□□□ 0.98
PCK1P35558 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
PCK1P35558 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC21.2■□□□□ 0.98
PCK1P35558 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PCK1P35558 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PCK1P35558 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
PCK1P35558 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC21.2■□□□□ 0.98
PCK1P35558 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
PCK1P35558 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC21.2■□□□□ 0.98
PCK1P35558 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC21.2■□□□□ 0.98
PCK1P35558 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC21.2■□□□□ 0.98
PCK1P35558 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC21.2■□□□□ 0.98
PCK1P35558 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PCK1P35558 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PCK1P35558 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PCK1P35558 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PCK1P35558 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC21.19■□□□□ 0.98
PCK1P35558 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PCK1P35558 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
PCK1P35558 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
PCK1P35558 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
PCK1P35558 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
PCK1P35558 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
PCK1P35558 MIR935-201ENST00000401179 91 ntBASIC21.19■□□□□ 0.98
PCK1P35558 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC21.19■□□□□ 0.98
PCK1P35558 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC21.19■□□□□ 0.98
PCK1P35558 AL356652.1-201ENST00000615962 565 ntBASIC21.19■□□□□ 0.98
PCK1P35558 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC21.19■□□□□ 0.98
PCK1P35558 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC21.19■□□□□ 0.98
PCK1P35558 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC21.19■□□□□ 0.98
PCK1P35558 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
PCK1P35558 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC21.19■□□□□ 0.98
PCK1P35558 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
PCK1P35558 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC21.19■□□□□ 0.98
PCK1P35558 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PCK1P35558 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
PCK1P35558 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PCK1P35558 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC21.18■□□□□ 0.98
PCK1P35558 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC21.18■□□□□ 0.98
PCK1P35558 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PCK1P35558 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PCK1P35558 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
PCK1P35558 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PCK1P35558 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PCK1P35558 AC007322.1-201ENST00000426983 750 ntBASIC21.18■□□□□ 0.98
PCK1P35558 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC21.18■□□□□ 0.98
PCK1P35558 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC21.18■□□□□ 0.98
PCK1P35558 AC092437.1-201ENST00000624794 1048 ntBASIC21.18■□□□□ 0.98
PCK1P35558 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PCK1P35558 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PCK1P35558 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PCK1P35558 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PCK1P35558 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PCK1P35558 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC21.18■□□□□ 0.98
PCK1P35558 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PCK1P35558 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
PCK1P35558 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PCK1P35558 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
PCK1P35558 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
PCK1P35558 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PCK1P35558 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
PCK1P35558 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PCK1P35558 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PCK1P35558 BET1L-204ENST00000410108 637 ntTSL 3 BASIC21.17■□□□□ 0.98
PCK1P35558 APTR-203ENST00000430801 583 ntTSL 5 BASIC21.17■□□□□ 0.98
PCK1P35558 PARL-206ENST00000435888 1098 ntTSL 5 BASIC21.17■□□□□ 0.98
PCK1P35558 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC21.17■□□□□ 0.98
PCK1P35558 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PCK1P35558 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC21.17■□□□□ 0.98
PCK1P35558 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
PCK1P35558 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PCK1P35558 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC21.17■□□□□ 0.98
PCK1P35558 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC21.17■□□□□ 0.98
PCK1P35558 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
PCK1P35558 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PCK1P35558 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PCK1P35558 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PCK1P35558 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PCK1P35558 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PCK1P35558 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC21.16■□□□□ 0.98
PCK1P35558 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PCK1P35558 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
PCK1P35558 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PCK1P35558 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PCK1P35558 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PCK1P35558 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PCK1P35558 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PCK1P35558 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PCK1P35558 MCRIP2P1-201ENST00000394346 511 ntBASIC21.16■□□□□ 0.98
PCK1P35558 CYP2T1P-201ENST00000432607 1285 ntBASIC21.16■□□□□ 0.98
PCK1P35558 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PCK1P35558 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC21.16■□□□□ 0.98
PCK1P35558 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PCK1P35558 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PCK1P35558 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PCK1P35558 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PCK1P35558 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PCK1P35558 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms