Protein–RNA interactions for Protein: P25846

MSH1, DNA mismatch repair protein MSH1, mitochondrial, yeastyeast

Predictions only

Length 959 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH1P25846 RPL39YJL189W 156 nt2.12□□□□□ -2.07
MSH1P25846 PAU18YLL064C 363 nt2.12□□□□□ -2.07
MSH1P25846 PAU6YNR076W 363 nt2.12□□□□□ -2.07
MSH1P25846 TFC8YPL007C 1767 nt2.12□□□□□ -2.07
MSH1P25846 RKM1YPL208W 1752 nt2.12□□□□□ -2.07
MSH1P25846 SSQ1YLR369W 1974 nt2.12□□□□□ -2.07
MSH1P25846 HDA3YPR179C 1968 nt2.12□□□□□ -2.07
MSH1P25846 PXA2YKL188C 2562 nt2.11□□□□□ -2.07
MSH1P25846 RPL35AYDL191W 363 nt2.11□□□□□ -2.07
MSH1P25846 YFL063WYFL063W 456 nt2.11□□□□□ -2.07
MSH1P25846 YHR007C-AYHR007C-A 216 nt2.11□□□□□ -2.07
MSH1P25846 PAC1YOR269W 1485 nt2.11□□□□□ -2.07
MSH1P25846 YHR214C-BYHR214C-B 5382 nt2.1□□□□□ -2.07
MSH1P25846 HER1YOR227W 3741 nt2.1□□□□□ -2.07
MSH1P25846 PDR8YLR266C 2106 nt2.09□□□□□ -2.07
MSH1P25846 SGO1YOR073W 1773 nt2.09□□□□□ -2.07
MSH1P25846 HMRA2YCR096C 360 nt2.09□□□□□ -2.07
MSH1P25846 YGR265WYGR265W 411 nt2.09□□□□□ -2.07
MSH1P25846 MCM22YJR135C 720 nt2.09□□□□□ -2.07
MSH1P25846 OSH6YKR003W 1347 nt2.09□□□□□ -2.08
MSH1P25846 OST1YJL002C 1431 nt2.08□□□□□ -2.08
MSH1P25846 CFT2YLR115W 2580 nt2.08□□□□□ -2.08
MSH1P25846 YDR169C-AYDR169C-A 150 nt2.08□□□□□ -2.08
MSH1P25846 YBL012CYBL012C 402 nt2.08□□□□□ -2.08
MSH1P25846 NOP53YPL146C 1368 nt2.08□□□□□ -2.08
MSH1P25846 CHC1YGL206C 4962 nt2.08□□□□□ -2.08
MSH1P25846 ZRG17YNR039C 1818 nt2.07□□□□□ -2.08
MSH1P25846 YGR250CYGR250C 2346 nt2.07□□□□□ -2.08
MSH1P25846 MSH6YDR097C 3729 nt2.07□□□□□ -2.08
MSH1P25846 MSC6YOR354C 2079 nt2.07□□□□□ -2.08
MSH1P25846 SWI5YDR146C 2130 nt2.07□□□□□ -2.08
MSH1P25846 YCL046WYCL046W 324 nt2.07□□□□□ -2.08
MSH1P25846 EFR3YMR212C 2349 nt2.07□□□□□ -2.08
MSH1P25846 SWI6YLR182W 2412 nt2.07□□□□□ -2.08
MSH1P25846 FKS1YLR342W 5631 nt2.06□□□□□ -2.08
MSH1P25846 RTP1YMR185W 2946 nt2.06□□□□□ -2.08
MSH1P25846 YHR063W-AYHR063W-A 336 nt2.06□□□□□ -2.08
MSH1P25846 YHR073W-AYHR073W-A 177 nt2.06□□□□□ -2.08
MSH1P25846 NUT2YPR168W 474 nt2.06□□□□□ -2.08
MSH1P25846 HCS1YKL017C 2052 nt2.06□□□□□ -2.08
MSH1P25846 LYS14YDR034C 2373 nt2.05□□□□□ -2.08
MSH1P25846 EMP24YGL200C 612 nt2.05□□□□□ -2.08
MSH1P25846 TAR1YLR154W-C 375 nt2.05□□□□□ -2.08
MSH1P25846 YPL152W-AYPL152W-A 99 nt2.05□□□□□ -2.08
MSH1P25846 GYP5YPL249C 2685 nt2.05□□□□□ -2.08
MSH1P25846 CTR9YOL145C 3234 nt2.05□□□□□ -2.08
MSH1P25846 YMR045CYMR045C 5268 nt2.05□□□□□ -2.08
MSH1P25846 MSH5YDL154W 2706 nt2.04□□□□□ -2.08
MSH1P25846 YHL041WYHL041W 450 nt2.04□□□□□ -2.08
MSH1P25846 RPL38YLR325C 237 nt2.04□□□□□ -2.08
MSH1P25846 SEY1YOR165W 2331 nt2.04□□□□□ -2.08
MSH1P25846 ATG11YPR049C 3537 nt2.04□□□□□ -2.08
MSH1P25846 LRE1YCL051W 1752 nt2.04□□□□□ -2.08
MSH1P25846 TBS1YBR150C 3285 nt2.04□□□□□ -2.08
MSH1P25846 SEC63YOR254C 1992 nt2.03□□□□□ -2.08
MSH1P25846 YCL023CYCL023C 348 nt2.03□□□□□ -2.08
MSH1P25846 RFX1YLR176C 2436 nt2.02□□□□□ -2.09
MSH1P25846 RLM1YPL089C 2031 nt2.02□□□□□ -2.09
MSH1P25846 YOP1YPR028W 543 nt2.02□□□□□ -2.09
MSH1P25846 HIR3YJR140C 4947 nt2.02□□□□□ -2.09
MSH1P25846 FAB1YFR019W 6837 nt2.01□□□□□ -2.09
MSH1P25846 UBR2YLR024C 5619 nt2.01□□□□□ -2.09
MSH1P25846 YDR048CYDR048C 315 nt2.01□□□□□ -2.09
MSH1P25846 YER172C-AYER172C-A 381 nt2.01□□□□□ -2.09
MSH1P25846 TRX1YLR043C 312 nt2.01□□□□□ -2.09
MSH1P25846 UPS1YLR193C 528 nt2.01□□□□□ -2.09
MSH1P25846 TMA7YLR262C-A 195 nt2.01□□□□□ -2.09
MSH1P25846 SAR1YPL218W 573 nt2.01□□□□□ -2.09
MSH1P25846 MAK10YEL053C 2202 nt2.01□□□□□ -2.09
MSH1P25846 MUK1YPL070W 1839 nt2.01□□□□□ -2.09
MSH1P25846 UTP21YLR409C 2820 nt2□□□□□ -2.09
MSH1P25846 CYC7YEL039C 342 nt2□□□□□ -2.09
MSH1P25846 HTB2YBL002W 396 nt2□□□□□ -2.09
MSH1P25846 snR51snR51 107 nt2□□□□□ -2.09
MSH1P25846 RIM20YOR275C 1986 nt1.99□□□□□ -2.09
MSH1P25846 YDR003W-AYDR003W-A 123 nt1.99□□□□□ -2.09
MSH1P25846 YGL149WYGL149W 306 nt1.99□□□□□ -2.09
MSH1P25846 SLY1YDR189W 2001 nt1.99□□□□□ -2.09
MSH1P25846 YJL015CYJL015C 285 nt1.98□□□□□ -2.09
MSH1P25846 YMR141W-AYMR141W-A 225 nt1.98□□□□□ -2.09
MSH1P25846 DBP6YNR038W 1890 nt1.98□□□□□ -2.09
MSH1P25846 IRE1YHR079C 3348 nt1.98□□□□□ -2.09
MSH1P25846 YOR343W-BYOR343W-B 5313 nt1.97□□□□□ -2.09
MSH1P25846 HTL1YCR020W-B 237 nt1.97□□□□□ -2.09
MSH1P25846 snR80snR80 171 nt1.97□□□□□ -2.09
MSH1P25846 YGR069WYGR069W 336 nt1.97□□□□□ -2.09
MSH1P25846 YJR039WYJR039W 3366 nt1.97□□□□□ -2.09
MSH1P25846 ZIP1YDR285W 2628 nt1.97□□□□□ -2.09
MSH1P25846 HSH155YMR288W 2916 nt1.97□□□□□ -2.09
MSH1P25846 DCP2YNL118C 2913 nt1.96□□□□□ -2.1
MSH1P25846 MYO2YOR326W 4725 nt1.96□□□□□ -2.1
MSH1P25846 ENV11YGR071C 2583 nt1.96□□□□□ -2.1
MSH1P25846 YML007C-AYML007C-A 111 nt1.95□□□□□ -2.1
MSH1P25846 HMI1YOL095C 2121 nt1.95□□□□□ -2.1
MSH1P25846 YLL032CYLL032C 2478 nt1.95□□□□□ -2.1
MSH1P25846 YOR093CYOR093C 4947 nt1.94□□□□□ -2.1
MSH1P25846 ADR1YDR216W 3972 nt1.94□□□□□ -2.1
MSH1P25846 MDM20YOL076W 2391 nt1.94□□□□□ -2.1
MSH1P25846 ALG13YGL047W 609 nt1.94□□□□□ -2.1
MSH1P25846 MVP1YMR004W 1536 nt1.93□□□□□ -2.1
Retrieved 100 of 7,029 protein–RNA pairs in 65.2 ms