Protein–RNA interactions for Protein: P25336

MSH3, DNA mismatch repair protein MSH3, yeastyeast

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH3P25336 YDR098C-BYDR098C-B 5268 nt2.81□□□□□ -1.96
MSH3P25336 YDR210C-DYDR210C-D 5268 nt2.81□□□□□ -1.96
MSH3P25336 YDR316W-BYDR316W-B 5268 nt2.81□□□□□ -1.96
MSH3P25336 YDR365W-BYDR365W-B 5268 nt2.81□□□□□ -1.96
MSH3P25336 YER138CYER138C 5268 nt2.81□□□□□ -1.96
MSH3P25336 YER160CYER160C 5268 nt2.81□□□□□ -1.96
MSH3P25336 YGR038C-BYGR038C-B 5268 nt2.81□□□□□ -1.96
MSH3P25336 YGR161C-DYGR161C-D 5268 nt2.81□□□□□ -1.96
MSH3P25336 YJR027WYJR027W 5268 nt2.81□□□□□ -1.96
MSH3P25336 YLR157C-BYLR157C-B 5268 nt2.81□□□□□ -1.96
MSH3P25336 YML039WYML039W 5268 nt2.81□□□□□ -1.96
MSH3P25336 YML045WYML045W 5268 nt2.81□□□□□ -1.96
MSH3P25336 YMR050CYMR050C 5268 nt2.81□□□□□ -1.96
MSH3P25336 YOL103W-BYOL103W-B 5268 nt2.81□□□□□ -1.96
MSH3P25336 YBR012W-BYBR012W-B 5271 nt2.81□□□□□ -1.96
MSH3P25336 YOR142W-BYOR142W-B 5268 nt2.81□□□□□ -1.96
MSH3P25336 YPL257W-BYPL257W-B 5268 nt2.81□□□□□ -1.96
MSH3P25336 YPR158W-BYPR158W-B 5271 nt2.81□□□□□ -1.96
MSH3P25336 ZRG8YER033C 3231 nt2.81□□□□□ -1.96
MSH3P25336 ISW1YBR245C 3390 nt2.81□□□□□ -1.96
MSH3P25336 RPS27BYHR021C 249 nt2.81□□□□□ -1.96
MSH3P25336 YBR131C-AYBR131C-A 90 nt2.81□□□□□ -1.96
MSH3P25336 INP51YIL002C 2841 nt2.81□□□□□ -1.96
MSH3P25336 SEC26YDR238C 2922 nt2.81□□□□□ -1.96
MSH3P25336 PSD2YGR170W 3417 nt2.8□□□□□ -1.96
MSH3P25336 MRD1YPR112C 2664 nt2.8□□□□□ -1.96
MSH3P25336 YKU80YMR106C 1890 nt2.8□□□□□ -1.96
MSH3P25336 RPO41YFL036W 4056 nt2.8□□□□□ -1.96
MSH3P25336 snR72snR72 98 nt2.8□□□□□ -1.96
MSH3P25336 GIS1YDR096W 2685 nt2.8□□□□□ -1.96
MSH3P25336 CDC53YDL132W 2448 nt2.8□□□□□ -1.96
MSH3P25336 NUM1YDR150W 8247 nt2.8□□□□□ -1.96
MSH3P25336 SWI5YDR146C 2130 nt2.8□□□□□ -1.96
MSH3P25336 SLM1YIL105C 2061 nt2.8□□□□□ -1.96
MSH3P25336 SMY2YBR172C 2223 nt2.79□□□□□ -1.96
MSH3P25336 ULI1YFR026C 510 nt2.79□□□□□ -1.96
MSH3P25336 COF1YLL050C 432 nt2.79□□□□□ -1.96
MSH3P25336 YOR381W-AYOR381W-A 168 nt2.79□□□□□ -1.96
MSH3P25336 snR52snR52 92 nt2.79□□□□□ -1.96
MSH3P25336 ARP8YOR141C 2646 nt2.79□□□□□ -1.96
MSH3P25336 HOS4YIL112W 3252 nt2.78□□□□□ -1.96
MSH3P25336 MGM1YOR211C 2646 nt2.78□□□□□ -1.96
MSH3P25336 NIP100YPL174C 2607 nt2.78□□□□□ -1.96
MSH3P25336 SWA2YDR320C 2007 nt2.78□□□□□ -1.96
MSH3P25336 YBT1YLL048C 4986 nt2.78□□□□□ -1.96
MSH3P25336 VTC1YER072W 390 nt2.78□□□□□ -1.96
MSH3P25336 YHR073W-AYHR073W-A 177 nt2.78□□□□□ -1.96
MSH3P25336 TOP2YNL088W 4287 nt2.78□□□□□ -1.96
MSH3P25336 SET2YJL168C 2202 nt2.78□□□□□ -1.96
MSH3P25336 CBF2YGR140W 2871 nt2.77□□□□□ -1.97
MSH3P25336 CLN3YAL040C 1743 nt2.77□□□□□ -1.97
MSH3P25336 tW(CCA)G1tW(CCA)G1 72 nt2.77□□□□□ -1.97
MSH3P25336 tW(CCA)G2tW(CCA)G2 72 nt2.77□□□□□ -1.97
MSH3P25336 tW(CCA)JtW(CCA)J 72 nt2.77□□□□□ -1.97
MSH3P25336 tW(CCA)KtW(CCA)K 72 nt2.77□□□□□ -1.97
MSH3P25336 tW(CCA)MtW(CCA)M 72 nt2.77□□□□□ -1.97
MSH3P25336 tW(CCA)PtW(CCA)P 72 nt2.77□□□□□ -1.97
MSH3P25336 YOR055WYOR055W 435 nt2.77□□□□□ -1.97
MSH3P25336 EMP24YGL200C 612 nt2.76□□□□□ -1.97
MSH3P25336 ECM12YHR021W-A 456 nt2.76□□□□□ -1.97
MSH3P25336 CSF1YLR087C 8877 nt2.76□□□□□ -1.97
MSH3P25336 LYS14YDR034C 2373 nt2.76□□□□□ -1.97
MSH3P25336 MCM10YIL150C 1716 nt2.76□□□□□ -1.97
MSH3P25336 YPP1YGR198W 2454 nt2.76□□□□□ -1.97
MSH3P25336 YGR050CYGR050C 357 nt2.75□□□□□ -1.97
MSH3P25336 YHR071C-AYHR071C-A 321 nt2.75□□□□□ -1.97
MSH3P25336 ESL2YKR096W 3588 nt2.75□□□□□ -1.97
MSH3P25336 BUB1YGR188C 3066 nt2.75□□□□□ -1.97
MSH3P25336 PDR1YGL013C 3207 nt2.74□□□□□ -1.97
MSH3P25336 YCR043CYCR043C 384 nt2.74□□□□□ -1.97
MSH3P25336 YBL012CYBL012C 402 nt2.74□□□□□ -1.97
MSH3P25336 SWR1YDR334W 4545 nt2.74□□□□□ -1.97
MSH3P25336 VMR1YHL035C 4779 nt2.73□□□□□ -1.97
MSH3P25336 AMS1YGL156W 3252 nt2.73□□□□□ -1.97
MSH3P25336 SPC98YNL126W 2541 nt2.73□□□□□ -1.97
MSH3P25336 YHR032W-AYHR032W-A 180 nt2.73□□□□□ -1.97
MSH3P25336 YOR161W-BYOR161W-B 261 nt2.73□□□□□ -1.97
MSH3P25336 snR48snR48 113 nt2.73□□□□□ -1.97
MSH3P25336 CUL3YGR003W 2235 nt2.73□□□□□ -1.97
MSH3P25336 VTC3YPL019C 2508 nt2.72□□□□□ -1.97
MSH3P25336 YOR394C-AYOR394C-A 168 nt2.72□□□□□ -1.97
MSH3P25336 SPF1YEL031W 3648 nt2.72□□□□□ -1.97
MSH3P25336 FKS3YMR306W 5358 nt2.72□□□□□ -1.97
MSH3P25336 MSC6YOR354C 2079 nt2.72□□□□□ -1.97
MSH3P25336 ELG1YOR144C 2376 nt2.71□□□□□ -1.98
MSH3P25336 snR70snR70 164 nt2.71□□□□□ -1.98
MSH3P25336 SRP14YDL092W 441 nt2.71□□□□□ -1.98
MSH3P25336 PAU8YAL068C 363 nt2.71□□□□□ -1.98
MSH3P25336 PAU18YLL064C 363 nt2.71□□□□□ -1.98
MSH3P25336 PAU6YNR076W 363 nt2.71□□□□□ -1.98
MSH3P25336 PAU20YOL161C 363 nt2.71□□□□□ -1.98
MSH3P25336 SIR3YLR442C 2937 nt2.71□□□□□ -1.98
MSH3P25336 SGS1YMR190C 4344 nt2.71□□□□□ -1.98
MSH3P25336 SPO75YLL005C 2607 nt2.71□□□□□ -1.98
MSH3P25336 ORC2YBR060C 1863 nt2.69□□□□□ -1.98
MSH3P25336 STE11YLR362W 2154 nt2.69□□□□□ -1.98
MSH3P25336 YFR016CYFR016C 3702 nt2.69□□□□□ -1.98
MSH3P25336 YBR174CYBR174C 315 nt2.69□□□□□ -1.98
MSH3P25336 FAR11YNL127W 2862 nt2.69□□□□□ -1.98
MSH3P25336 PDR3YBL005W 2931 nt2.69□□□□□ -1.98
Retrieved 100 of 7,029 protein–RNA pairs in 111.2 ms