RNA–Protein interactions for RNA: YGR198W

YPP1, Transcript of Cargo-transport protein involved in endocytosis, yeastyeast

Gene YPP1, Length 2,454 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YPP1YGR198W MON2P48563 1636 aaPredicted RBP7.44□□□□□ -1.22
YPP1YGR198W INO80P53115 1489 aa7.31□□□□□ -1.24
YPP1YGR198W DNA2P38859 1522 aa6.99□□□□□ -1.29
YPP1YGR198W RSE1Q04693 1361 aaKnown RBP6.94□□□□□ -1.3
YPP1YGR198W KOG1P38873 1557 aa6.88□□□□□ -1.31
YPP1YGR198W SWR1Q05471 1514 aa6.83□□□□□ -1.32
YPP1YGR198W SPA2P23201 1466 aaKnown RBP6.65□□□□□ -1.35
YPP1YGR198W TY1B-DR4Q07793 1604 aa6.6□□□□□ -1.35
YPP1YGR198W TCB3Q03640 1545 aaKnown RBP6.53□□□□□ -1.36
YPP1YGR198W MTC1P47018 478 aaKnown RBP6.36□□□□□ -1.39
YPP1YGR198W MIF2P35201 549 aa6.28□□□□□ -1.4
YPP1YGR198W THO2P53552 1597 aaKnown RBP6.23□□□□□ -1.41
YPP1YGR198W ECM5Q03214 1411 aa6.21□□□□□ -1.41
YPP1YGR198W REV3P14284 1504 aa6.21□□□□□ -1.42
YPP1YGR198W HSL1P34244 1518 aa6.2□□□□□ -1.42
YPP1YGR198W SPT6P23615 1451 aaKnown RBP6.18□□□□□ -1.42
YPP1YGR198W MDS3P53094 1487 aa6.16□□□□□ -1.42
YPP1YGR198W BUD4P47136 1447 aa6.16□□□□□ -1.42
YPP1YGR198W PEP1P32319 1579 aa6.08□□□□□ -1.44
YPP1YGR198W BPT1P14772 1559 aa6.04□□□□□ -1.44
YPP1YGR198W HIR3P47171 1648 aa6.03□□□□□ -1.44
YPP1YGR198W YFR006WP43590 535 aa5.98□□□□□ -1.45
YPP1YGR198W SGS1P35187 1447 aa5.97□□□□□ -1.45
YPP1YGR198W YCF1P39109 1515 aaKnown RBP5.94□□□□□ -1.46
YPP1YGR198W MYO2P19524 1574 aaKnown RBP5.92□□□□□ -1.46
YPP1YGR198W ATG2P53855 1592 aa5.91□□□□□ -1.46
YPP1YGR198W LTE1P07866 1435 aa5.87□□□□□ -1.47
YPP1YGR198W SSK2P53599 1579 aa5.87□□□□□ -1.47
YPP1YGR198W BNI1P41832 1953 aa5.86□□□□□ -1.47
YPP1YGR198W MET5P47169 1442 aa5.84□□□□□ -1.47
YPP1YGR198W CDC25P04821 1589 aa5.81□□□□□ -1.48
YPP1YGR198W DNF1P32660 1571 aa5.8□□□□□ -1.48
YPP1YGR198W RPA190P10964 1664 aaKnown RBP5.8□□□□□ -1.48
YPP1YGR198W IRC20Q06554 1556 aa5.79□□□□□ -1.48
YPP1YGR198W XRN1P22147 1528 aaKnown RBP5.78□□□□□ -1.48
YPP1YGR198W TAF2P23255 1407 aa5.77□□□□□ -1.49
YPP1YGR198W ESC1Q03661 1658 aaKnown RBP5.75□□□□□ -1.49
YPP1YGR198W ABP1P15891 592 aaKnown RBP5.74□□□□□ -1.49
YPP1YGR198W GEA2P39993 1459 aaKnown RBP5.71□□□□□ -1.49
YPP1YGR198W RPO31P04051 1460 aa5.7□□□□□ -1.5
YPP1YGR198W RKR1Q04781 1562 aa5.69□□□□□ -1.5
YPP1YGR198W FAP1P53971 965 aa5.68□□□□□ -1.5
YPP1YGR198W MMS1Q06211 1407 aa5.67□□□□□ -1.5
YPP1YGR198W ITT1Q04638 464 aa5.66□□□□□ -1.5
YPP1YGR198W SIN3P22579 1536 aa5.66□□□□□ -1.5
YPP1YGR198W CHD1P32657 1468 aa5.62□□□□□ -1.51
YPP1YGR198W SKI3P17883 1432 aaKnown RBP5.62□□□□□ -1.51
YPP1YGR198W UFD4P33202 1483 aa5.61□□□□□ -1.51
YPP1YGR198W DNF2Q12675 1612 aa5.59□□□□□ -1.51
YPP1YGR198W ESP1Q03018 1630 aa5.59□□□□□ -1.52
YPP1YGR198W TY1B-BRQ12193 1756 aa5.58□□□□□ -1.52
YPP1YGR198W TY1B-GR3Q12316 1755 aa5.58□□□□□ -1.52
YPP1YGR198W TY1B-ORQ92393 1755 aa5.58□□□□□ -1.52
YPP1YGR198W YOR093CQ12275 1648 aa5.57□□□□□ -1.52
YPP1YGR198W DRS2P39524 1355 aa5.55□□□□□ -1.52
YPP1YGR198W PAN1P32521 1480 aa5.54□□□□□ -1.52
YPP1YGR198W SCC2Q04002 1493 aa5.53□□□□□ -1.52
YPP1YGR198W TY2B-LR1P0C2J3 1770 aa5.51□□□□□ -1.53
YPP1YGR198W TY2B-FP0CX63 1770 aa5.51□□□□□ -1.53
YPP1YGR198W TY2B-GR2P0CX64 1770 aa5.51□□□□□ -1.53
YPP1YGR198W TY2B-CP25384 1770 aa5.51□□□□□ -1.53
YPP1YGR198W TY2B-DR2Q03494 1770 aa5.51□□□□□ -1.53
YPP1YGR198W TY1B-DR1Q03855 1755 aa5.51□□□□□ -1.53
YPP1YGR198W TY2B-DR3Q07791 1770 aaKnown RBP5.51□□□□□ -1.53
YPP1YGR198W TY2B-OR1Q12113 1770 aa5.51□□□□□ -1.53
YPP1YGR198W TY2B-DR1Q12472 1770 aa5.51□□□□□ -1.53
YPP1YGR198W TY2B-OR2Q12501 1770 aa5.51□□□□□ -1.53
YPP1YGR198W YPK9Q12697 1472 aa5.51□□□□□ -1.53
YPP1YGR198W YRF1-1P0CX20 1796 aa5.48□□□□□ -1.53
YPP1YGR198W YRF1-5P0CX21 1796 aa5.48□□□□□ -1.53
YPP1YGR198W YRF1-8P0CX22 1796 aa5.48□□□□□ -1.53
YPP1YGR198W VPS15P22219 1454 aa5.46□□□□□ -1.54
YPP1YGR198W TY1B-HO13535 1793 aa5.46□□□□□ -1.54
YPP1YGR198W TY1B-DR5P0C2I2 1755 aa5.46□□□□□ -1.54
YPP1YGR198W TY1B-DR6P0C2I3 1755 aa5.46□□□□□ -1.54
YPP1YGR198W TY1B-LR2P0C2I5 1755 aa5.46□□□□□ -1.54
YPP1YGR198W TY1B-LR3P0C2I6 1755 aaKnown RBP5.46□□□□□ -1.54
YPP1YGR198W TY1B-PR1P0C2I9 1755 aaKnown RBP5.46□□□□□ -1.54
YPP1YGR198W TY1B-PR2P0C2J0 1756 aa5.46□□□□□ -1.54
YPP1YGR198W TY1B-PR3P0C2J1 1755 aaKnown RBP5.46□□□□□ -1.54
YPP1YGR198W TY1B-JR1P47098 1755 aa5.46□□□□□ -1.54
YPP1YGR198W TY1B-ML2Q03434 1755 aaKnown RBP5.46□□□□□ -1.54
YPP1YGR198W TY1B-ER1Q03612 1755 aa5.46□□□□□ -1.54
YPP1YGR198W TY1B-ML1Q04711 1755 aaKnown RBP5.46□□□□□ -1.54
YPP1YGR198W TY1B-GR2Q12269 1755 aa5.46□□□□□ -1.54
YPP1YGR198W TY1B-OLQ12273 1755 aa5.46□□□□□ -1.54
YPP1YGR198W TY1B-PLQ12414 1755 aaKnown RBP5.46□□□□□ -1.54
YPP1YGR198W TY2B-BQ12491 1770 aa5.41□□□□□ -1.54
YPP1YGR198W NTE1Q04958 1679 aa5.4□□□□□ -1.54
YPP1YGR198W TRM732Q03496 1420 aa5.4□□□□□ -1.55
YPP1YGR198W DRS1P32892 752 aaKnown RBP5.39□□□□□ -1.55
YPP1YGR198W NUP159P40477 1460 aa5.39□□□□□ -1.55
YPP1YGR198W PRY3P47033 881 aa5.37□□□□□ -1.55
YPP1YGR198W MMS22Q06164 1454 aa5.37□□□□□ -1.55
YPP1YGR198W TY1B-DR3Q99231 1755 aa5.36□□□□□ -1.55
YPP1YGR198W YCK3P39962 524 aa5.36□□□□□ -1.55
YPP1YGR198W NUP170P38181 1502 aa5.35□□□□□ -1.55
YPP1YGR198W TOP2P06786 1428 aaKnown RBP5.33□□□□□ -1.56
YPP1YGR198W SPO14P36126 1683 aa5.32□□□□□ -1.56
YPP1YGR198W RPO21P04050 1733 aaKnown RBP5.32□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms