Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 TSPY14P-201ENST00000303979 915 ntBASIC24.94■■□□□ 1.58
KCNA3P22001 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
KCNA3P22001 INGX-201ENST00000359239 846 ntBASIC24.94■■□□□ 1.58
KCNA3P22001 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC24.94■■□□□ 1.58
KCNA3P22001 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC24.94■■□□□ 1.58
KCNA3P22001 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC24.94■■□□□ 1.58
KCNA3P22001 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC24.94■■□□□ 1.58
KCNA3P22001 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC24.94■■□□□ 1.58
KCNA3P22001 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
KCNA3P22001 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
KCNA3P22001 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC24.94■■□□□ 1.58
KCNA3P22001 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
KCNA3P22001 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC24.93■■□□□ 1.58
KCNA3P22001 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
KCNA3P22001 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC24.93■■□□□ 1.58
KCNA3P22001 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
KCNA3P22001 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC24.93■■□□□ 1.58
KCNA3P22001 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC24.93■■□□□ 1.58
KCNA3P22001 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
KCNA3P22001 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
KCNA3P22001 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC24.93■■□□□ 1.58
KCNA3P22001 AK4P3-201ENST00000418260 669 ntBASIC24.93■■□□□ 1.58
KCNA3P22001 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC24.93■■□□□ 1.58
KCNA3P22001 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC24.93■■□□□ 1.58
KCNA3P22001 KRT18P56-201ENST00000507275 550 ntBASIC24.93■■□□□ 1.58
KCNA3P22001 EGLN1P1-201ENST00000531623 762 ntBASIC24.93■■□□□ 1.58
KCNA3P22001 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC24.93■■□□□ 1.58
KCNA3P22001 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC24.93■■□□□ 1.58
KCNA3P22001 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC24.93■■□□□ 1.58
KCNA3P22001 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC24.93■■□□□ 1.58
KCNA3P22001 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC24.93■■□□□ 1.58
KCNA3P22001 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
KCNA3P22001 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC24.93■■□□□ 1.58
KCNA3P22001 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
KCNA3P22001 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
KCNA3P22001 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC24.92■■□□□ 1.58
KCNA3P22001 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC24.92■■□□□ 1.58
KCNA3P22001 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
KCNA3P22001 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC24.92■■□□□ 1.58
KCNA3P22001 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC24.92■■□□□ 1.58
KCNA3P22001 ATP5G1P1-201ENST00000448724 379 ntBASIC24.92■■□□□ 1.58
KCNA3P22001 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC24.92■■□□□ 1.58
KCNA3P22001 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC24.92■■□□□ 1.58
KCNA3P22001 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC24.92■■□□□ 1.58
KCNA3P22001 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC24.92■■□□□ 1.58
KCNA3P22001 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
KCNA3P22001 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC24.91■■□□□ 1.58
KCNA3P22001 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
KCNA3P22001 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC24.91■■□□□ 1.58
KCNA3P22001 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC24.91■■□□□ 1.58
KCNA3P22001 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC24.91■■□□□ 1.58
KCNA3P22001 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC24.91■■□□□ 1.58
KCNA3P22001 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC24.91■■□□□ 1.58
KCNA3P22001 AL031133.1-201ENST00000406807 723 ntBASIC24.91■■□□□ 1.58
KCNA3P22001 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
KCNA3P22001 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
KCNA3P22001 AC091390.4-202ENST00000476426 537 ntBASIC24.91■■□□□ 1.58
KCNA3P22001 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC24.91■■□□□ 1.58
KCNA3P22001 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC24.91■■□□□ 1.58
KCNA3P22001 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC24.91■■□□□ 1.58
KCNA3P22001 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC24.91■■□□□ 1.58
KCNA3P22001 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC24.91■■□□□ 1.58
KCNA3P22001 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
KCNA3P22001 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
KCNA3P22001 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
KCNA3P22001 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
KCNA3P22001 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC24.9■■□□□ 1.58
KCNA3P22001 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
KCNA3P22001 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC24.9■■□□□ 1.58
KCNA3P22001 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
KCNA3P22001 BX664615.1-201ENST00000443558 458 ntBASIC24.9■■□□□ 1.58
KCNA3P22001 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC24.9■■□□□ 1.58
KCNA3P22001 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC24.9■■□□□ 1.58
KCNA3P22001 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
KCNA3P22001 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC24.9■■□□□ 1.58
KCNA3P22001 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
KCNA3P22001 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC24.89■■□□□ 1.58
KCNA3P22001 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
KCNA3P22001 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC24.89■■□□□ 1.58
KCNA3P22001 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
KCNA3P22001 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
KCNA3P22001 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC24.89■■□□□ 1.58
KCNA3P22001 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
KCNA3P22001 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC24.89■■□□□ 1.58
KCNA3P22001 AP005242.2-201ENST00000580065 1175 ntBASIC24.89■■□□□ 1.58
KCNA3P22001 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC24.89■■□□□ 1.58
KCNA3P22001 FAM87A-204ENST00000613235 858 ntBASIC24.89■■□□□ 1.58
KCNA3P22001 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC24.89■■□□□ 1.57
KCNA3P22001 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
KCNA3P22001 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC24.89■■□□□ 1.57
KCNA3P22001 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC24.89■■□□□ 1.57
KCNA3P22001 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC24.88■■□□□ 1.57
KCNA3P22001 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
KCNA3P22001 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
KCNA3P22001 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC24.88■■□□□ 1.57
KCNA3P22001 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
KCNA3P22001 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC24.88■■□□□ 1.57
KCNA3P22001 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
KCNA3P22001 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
KCNA3P22001 AC117947.1-201ENST00000427448 529 ntBASIC24.88■■□□□ 1.57
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms