Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
TNFRSF1BP20333 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
TNFRSF1BP20333 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC18.72■□□□□ 0.59
TNFRSF1BP20333 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC18.72■□□□□ 0.59
TNFRSF1BP20333 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC18.72■□□□□ 0.59
TNFRSF1BP20333 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
TNFRSF1BP20333 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC18.72■□□□□ 0.59
TNFRSF1BP20333 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TNFRSF1BP20333 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
TNFRSF1BP20333 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC18.72■□□□□ 0.59
TNFRSF1BP20333 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
TNFRSF1BP20333 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
TNFRSF1BP20333 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TNFRSF1BP20333 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
TNFRSF1BP20333 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TNFRSF1BP20333 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TNFRSF1BP20333 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
TNFRSF1BP20333 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
TNFRSF1BP20333 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC18.71■□□□□ 0.59
TNFRSF1BP20333 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TNFRSF1BP20333 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
TNFRSF1BP20333 AC123595.1-201ENST00000440769 1046 ntBASIC18.71■□□□□ 0.59
TNFRSF1BP20333 YBX1P1-201ENST00000445822 960 ntBASIC18.71■□□□□ 0.59
TNFRSF1BP20333 KRT18P14-201ENST00000534205 1250 ntBASIC18.71■□□□□ 0.59
TNFRSF1BP20333 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TNFRSF1BP20333 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.71■□□□□ 0.59
TNFRSF1BP20333 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
TNFRSF1BP20333 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC18.71■□□□□ 0.59
TNFRSF1BP20333 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
TNFRSF1BP20333 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TNFRSF1BP20333 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TNFRSF1BP20333 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TNFRSF1BP20333 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.58
TNFRSF1BP20333 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
TNFRSF1BP20333 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TNFRSF1BP20333 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
TNFRSF1BP20333 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TNFRSF1BP20333 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TNFRSF1BP20333 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TNFRSF1BP20333 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TNFRSF1BP20333 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TNFRSF1BP20333 MIR638-201ENST00000385237 100 ntBASIC18.7■□□□□ 0.58
TNFRSF1BP20333 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC18.7■□□□□ 0.58
TNFRSF1BP20333 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
TNFRSF1BP20333 KRT18P20-201ENST00000548986 1279 ntBASIC18.7■□□□□ 0.58
TNFRSF1BP20333 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TNFRSF1BP20333 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
TNFRSF1BP20333 KRT18P61-201ENST00000585825 1298 ntBASIC18.7■□□□□ 0.58
TNFRSF1BP20333 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TNFRSF1BP20333 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TNFRSF1BP20333 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
TNFRSF1BP20333 AC019069.1-201ENST00000610008 1333 ntBASIC18.7■□□□□ 0.58
TNFRSF1BP20333 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TNFRSF1BP20333 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC18.69■□□□□ 0.58
TNFRSF1BP20333 AC243732.1-201ENST00000612648 864 ntBASIC18.69■□□□□ 0.58
TNFRSF1BP20333 RAB43-208ENST00000615093 783 ntTSL 5 BASIC18.69■□□□□ 0.58
TNFRSF1BP20333 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC18.69■□□□□ 0.58
TNFRSF1BP20333 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TNFRSF1BP20333 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC18.69■□□□□ 0.58
TNFRSF1BP20333 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TNFRSF1BP20333 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC18.69■□□□□ 0.58
TNFRSF1BP20333 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
TNFRSF1BP20333 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18.69■□□□□ 0.58
TNFRSF1BP20333 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TNFRSF1BP20333 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TNFRSF1BP20333 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TNFRSF1BP20333 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TNFRSF1BP20333 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TNFRSF1BP20333 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC18.68■□□□□ 0.58
TNFRSF1BP20333 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC18.68■□□□□ 0.58
TNFRSF1BP20333 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TNFRSF1BP20333 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TNFRSF1BP20333 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TNFRSF1BP20333 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TNFRSF1BP20333 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
TNFRSF1BP20333 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC18.68■□□□□ 0.58
TNFRSF1BP20333 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TNFRSF1BP20333 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
TNFRSF1BP20333 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
TNFRSF1BP20333 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TNFRSF1BP20333 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC18.68■□□□□ 0.58
TNFRSF1BP20333 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC18.68■□□□□ 0.58
TNFRSF1BP20333 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.68■□□□□ 0.58
TNFRSF1BP20333 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TNFRSF1BP20333 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TNFRSF1BP20333 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TNFRSF1BP20333 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC18.68■□□□□ 0.58
TNFRSF1BP20333 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TNFRSF1BP20333 H19-201ENST00000411754 1788 ntTSL 5 BASIC18.68■□□□□ 0.58
TNFRSF1BP20333 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TNFRSF1BP20333 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TNFRSF1BP20333 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TNFRSF1BP20333 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC18.67■□□□□ 0.58
TNFRSF1BP20333 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
TNFRSF1BP20333 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC18.67■□□□□ 0.58
TNFRSF1BP20333 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TNFRSF1BP20333 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.67■□□□□ 0.58
TNFRSF1BP20333 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TNFRSF1BP20333 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TNFRSF1BP20333 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms