Protein–RNA interactions for Protein: P07858

CTSB, Cathepsin B, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSBP07858 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC19.17■□□□□ 0.66
CTSBP07858 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CTSBP07858 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
CTSBP07858 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC19.17■□□□□ 0.66
CTSBP07858 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
CTSBP07858 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CTSBP07858 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CTSBP07858 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CTSBP07858 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.17■□□□□ 0.66
CTSBP07858 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CTSBP07858 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC19.17■□□□□ 0.66
CTSBP07858 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
CTSBP07858 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CTSBP07858 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
CTSBP07858 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC19.16■□□□□ 0.66
CTSBP07858 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.16■□□□□ 0.66
CTSBP07858 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CTSBP07858 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
CTSBP07858 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CTSBP07858 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC19.16■□□□□ 0.66
CTSBP07858 POM121L13P-201ENST00000422362 380 ntBASIC19.16■□□□□ 0.66
CTSBP07858 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
CTSBP07858 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC19.16■□□□□ 0.66
CTSBP07858 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CTSBP07858 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC19.16■□□□□ 0.66
CTSBP07858 DET1-205ENST00000558413 583 ntTSL 4 BASIC19.16■□□□□ 0.66
CTSBP07858 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CTSBP07858 AC142381.4-202ENST00000563973 229 ntBASIC19.16■□□□□ 0.66
CTSBP07858 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CTSBP07858 AC120498.8-201ENST00000614275 531 ntBASIC19.16■□□□□ 0.66
CTSBP07858 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC19.16■□□□□ 0.66
CTSBP07858 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CTSBP07858 DPP3P2-201ENST00000416030 1696 ntBASIC19.16■□□□□ 0.66
CTSBP07858 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC19.16■□□□□ 0.66
CTSBP07858 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CTSBP07858 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC19.16■□□□□ 0.66
CTSBP07858 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CTSBP07858 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC19.15■□□□□ 0.66
CTSBP07858 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CTSBP07858 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC19.15■□□□□ 0.66
CTSBP07858 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CTSBP07858 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC19.15■□□□□ 0.66
CTSBP07858 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CTSBP07858 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CTSBP07858 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CTSBP07858 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CTSBP07858 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CTSBP07858 PEX7-202ENST00000367756 680 ntTSL 3 BASIC19.15■□□□□ 0.66
CTSBP07858 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CTSBP07858 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CTSBP07858 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC19.15■□□□□ 0.66
CTSBP07858 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC19.15■□□□□ 0.66
CTSBP07858 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
CTSBP07858 IRX5-204ENST00000560154 879 ntTSL 5 BASIC19.15■□□□□ 0.66
CTSBP07858 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
CTSBP07858 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CTSBP07858 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CTSBP07858 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CTSBP07858 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CTSBP07858 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CTSBP07858 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CTSBP07858 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CTSBP07858 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
CTSBP07858 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CTSBP07858 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
CTSBP07858 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
CTSBP07858 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CTSBP07858 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CTSBP07858 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
CTSBP07858 KRT17P3-201ENST00000420566 1262 ntBASIC19.14■□□□□ 0.65
CTSBP07858 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
CTSBP07858 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CTSBP07858 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CTSBP07858 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC19.14■□□□□ 0.65
CTSBP07858 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC19.14■□□□□ 0.65
CTSBP07858 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
CTSBP07858 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CTSBP07858 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC19.14■□□□□ 0.65
CTSBP07858 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CTSBP07858 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
CTSBP07858 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
CTSBP07858 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CTSBP07858 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.13■□□□□ 0.65
CTSBP07858 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
CTSBP07858 SMG8-203ENST00000578922 2178 ntBASIC19.13■□□□□ 0.65
CTSBP07858 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CTSBP07858 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CTSBP07858 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CTSBP07858 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CTSBP07858 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC19.13■□□□□ 0.65
CTSBP07858 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
CTSBP07858 RER1-204ENST00000378518 522 ntTSL 3 BASIC19.13■□□□□ 0.65
CTSBP07858 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CTSBP07858 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC19.13■□□□□ 0.65
CTSBP07858 C1QBPP2-201ENST00000528754 825 ntBASIC19.13■□□□□ 0.65
CTSBP07858 RN7SL471P-201ENST00000580476 299 ntBASIC19.13■□□□□ 0.65
CTSBP07858 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC19.13■□□□□ 0.65
CTSBP07858 AL359736.2-201ENST00000621992 437 ntBASIC19.13■□□□□ 0.65
CTSBP07858 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CTSBP07858 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms