Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
APOBP04114 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC12.71□□□□□ -0.37
APOBP04114 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
APOBP04114 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
APOBP04114 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC12.71□□□□□ -0.38
APOBP04114 SAPCD2P2-201ENST00000431719 1174 ntBASIC12.71□□□□□ -0.38
APOBP04114 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC12.71□□□□□ -0.38
APOBP04114 AL121829.2-201ENST00000620908 328 ntBASIC12.71□□□□□ -0.38
APOBP04114 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
APOBP04114 KRT16P1-201ENST00000399124 1418 ntBASIC12.71□□□□□ -0.38
APOBP04114 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
APOBP04114 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.38
APOBP04114 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
APOBP04114 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
APOBP04114 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.38
APOBP04114 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC12.71□□□□□ -0.38
APOBP04114 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC12.71□□□□□ -0.38
APOBP04114 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.38
APOBP04114 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC12.71□□□□□ -0.38
APOBP04114 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC12.71□□□□□ -0.38
APOBP04114 DGCR10-201ENST00000609839 495 ntBASIC12.71□□□□□ -0.38
APOBP04114 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
APOBP04114 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
APOBP04114 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
APOBP04114 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
APOBP04114 AL138966.2-201ENST00000621997 464 ntBASIC12.7□□□□□ -0.38
APOBP04114 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
APOBP04114 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC12.7□□□□□ -0.38
APOBP04114 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
APOBP04114 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC12.7□□□□□ -0.38
APOBP04114 AL450487.1-201ENST00000426799 995 ntBASIC12.7□□□□□ -0.38
APOBP04114 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
APOBP04114 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC12.7□□□□□ -0.38
APOBP04114 SLC25A1P4-201ENST00000567977 778 ntBASIC12.7□□□□□ -0.38
APOBP04114 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC12.7□□□□□ -0.38
APOBP04114 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
APOBP04114 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
APOBP04114 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC12.7□□□□□ -0.38
APOBP04114 AC091390.4-202ENST00000476426 537 ntBASIC12.7□□□□□ -0.38
APOBP04114 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
APOBP04114 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
APOBP04114 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
APOBP04114 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC12.69□□□□□ -0.38
APOBP04114 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
APOBP04114 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC12.69□□□□□ -0.38
APOBP04114 AC023632.3-201ENST00000521633 145 ntBASIC12.69□□□□□ -0.38
APOBP04114 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
APOBP04114 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
APOBP04114 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC12.69□□□□□ -0.38
APOBP04114 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC12.69□□□□□ -0.38
APOBP04114 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC12.69□□□□□ -0.38
APOBP04114 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
APOBP04114 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
APOBP04114 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
APOBP04114 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
APOBP04114 AL445675.2-201ENST00000620291 557 ntBASIC12.69□□□□□ -0.38
APOBP04114 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
APOBP04114 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC12.69□□□□□ -0.38
APOBP04114 FAM99A-202ENST00000538190 1989 ntBASIC12.69□□□□□ -0.38
APOBP04114 COPE-203ENST00000351079 907 ntTSL 2 BASIC12.69□□□□□ -0.38
APOBP04114 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
APOBP04114 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
APOBP04114 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC12.69□□□□□ -0.38
APOBP04114 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC12.69□□□□□ -0.38
APOBP04114 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
APOBP04114 AC130371.2-201ENST00000619443 611 ntBASIC12.69□□□□□ -0.38
APOBP04114 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
APOBP04114 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC12.69□□□□□ -0.38
APOBP04114 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
APOBP04114 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
APOBP04114 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC12.69□□□□□ -0.38
APOBP04114 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC12.69□□□□□ -0.38
APOBP04114 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
APOBP04114 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
APOBP04114 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC12.68□□□□□ -0.38
APOBP04114 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC12.68□□□□□ -0.38
APOBP04114 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
APOBP04114 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
APOBP04114 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
APOBP04114 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC12.68□□□□□ -0.38
APOBP04114 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
APOBP04114 ATP5G1P1-201ENST00000448724 379 ntBASIC12.68□□□□□ -0.38
APOBP04114 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC12.68□□□□□ -0.38
APOBP04114 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC12.68□□□□□ -0.38
APOBP04114 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC12.68□□□□□ -0.38
APOBP04114 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
APOBP04114 PALM-207ENST00000590161 2137 ntTSL 4 BASIC12.68□□□□□ -0.38
APOBP04114 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
APOBP04114 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
APOBP04114 MED25-212ENST00000618715 1467 ntTSL 5 BASIC12.68□□□□□ -0.38
APOBP04114 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
APOBP04114 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
APOBP04114 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
APOBP04114 AC063952.2-201ENST00000498792 1227 ntBASIC12.68□□□□□ -0.38
APOBP04114 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC12.68□□□□□ -0.38
APOBP04114 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
APOBP04114 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC12.68□□□□□ -0.38
APOBP04114 C1orf229-201ENST00000623686 2258 ntBASIC12.68□□□□□ -0.38
APOBP04114 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
APOBP04114 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms