Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
CNOT4O95628 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
CNOT4O95628 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC17.89■□□□□ 0.45
CNOT4O95628 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CNOT4O95628 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CNOT4O95628 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC17.89■□□□□ 0.45
CNOT4O95628 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CNOT4O95628 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC17.89■□□□□ 0.45
CNOT4O95628 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CNOT4O95628 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC17.89■□□□□ 0.45
CNOT4O95628 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
CNOT4O95628 IRX5-204ENST00000560154 879 ntTSL 5 BASIC17.89■□□□□ 0.45
CNOT4O95628 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CNOT4O95628 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC17.89■□□□□ 0.45
CNOT4O95628 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
CNOT4O95628 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC17.89■□□□□ 0.45
CNOT4O95628 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CNOT4O95628 INO80E-214ENST00000620599 515 ntTSL 2 BASIC17.89■□□□□ 0.45
CNOT4O95628 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.89■□□□□ 0.45
CNOT4O95628 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CNOT4O95628 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CNOT4O95628 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC17.89■□□□□ 0.45
CNOT4O95628 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CNOT4O95628 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CNOT4O95628 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC17.89■□□□□ 0.45
CNOT4O95628 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
CNOT4O95628 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CNOT4O95628 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
CNOT4O95628 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CNOT4O95628 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CNOT4O95628 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CNOT4O95628 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC17.88■□□□□ 0.45
CNOT4O95628 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
CNOT4O95628 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC17.88■□□□□ 0.45
CNOT4O95628 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC17.88■□□□□ 0.45
CNOT4O95628 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
CNOT4O95628 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC17.88■□□□□ 0.45
CNOT4O95628 RPS2P52-201ENST00000469610 820 ntBASIC17.88■□□□□ 0.45
CNOT4O95628 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CNOT4O95628 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC17.88■□□□□ 0.45
CNOT4O95628 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CNOT4O95628 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CNOT4O95628 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CNOT4O95628 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC17.88■□□□□ 0.45
CNOT4O95628 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CNOT4O95628 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC17.88■□□□□ 0.45
CNOT4O95628 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
CNOT4O95628 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CNOT4O95628 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
CNOT4O95628 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC17.88■□□□□ 0.45
CNOT4O95628 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CNOT4O95628 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC17.87■□□□□ 0.45
CNOT4O95628 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
CNOT4O95628 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC17.87■□□□□ 0.45
CNOT4O95628 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
CNOT4O95628 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CNOT4O95628 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CNOT4O95628 AC006128.1-201ENST00000624704 1661 ntBASIC17.87■□□□□ 0.45
CNOT4O95628 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CNOT4O95628 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CNOT4O95628 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
CNOT4O95628 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CNOT4O95628 PLK5-205ENST00000642079 1969 ntBASIC17.87■□□□□ 0.45
CNOT4O95628 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CNOT4O95628 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC17.87■□□□□ 0.45
CNOT4O95628 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CNOT4O95628 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CNOT4O95628 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
CNOT4O95628 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CNOT4O95628 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CNOT4O95628 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CNOT4O95628 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC17.86■□□□□ 0.45
CNOT4O95628 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CNOT4O95628 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC17.86■□□□□ 0.45
CNOT4O95628 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
CNOT4O95628 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CNOT4O95628 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
CNOT4O95628 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CNOT4O95628 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CNOT4O95628 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
CNOT4O95628 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CNOT4O95628 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CNOT4O95628 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CNOT4O95628 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC17.86■□□□□ 0.45
CNOT4O95628 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC17.86■□□□□ 0.45
CNOT4O95628 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC17.86■□□□□ 0.45
CNOT4O95628 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CNOT4O95628 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CNOT4O95628 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CNOT4O95628 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CNOT4O95628 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CNOT4O95628 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC17.86■□□□□ 0.45
CNOT4O95628 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CNOT4O95628 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CNOT4O95628 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CNOT4O95628 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CNOT4O95628 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CNOT4O95628 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CNOT4O95628 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
CNOT4O95628 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms