Protein–RNA interactions for Protein: O95076

ALX3, Homeobox protein aristaless-like 3, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX3O95076 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
ALX3O95076 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ALX3O95076 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC17.76■□□□□ 0.43
ALX3O95076 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
ALX3O95076 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
ALX3O95076 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ALX3O95076 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
ALX3O95076 GLI3-203ENST00000437480 451 ntTSL 2 BASIC17.76■□□□□ 0.43
ALX3O95076 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ALX3O95076 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC17.76■□□□□ 0.43
ALX3O95076 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC17.76■□□□□ 0.43
ALX3O95076 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
ALX3O95076 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC17.76■□□□□ 0.43
ALX3O95076 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.76■□□□□ 0.43
ALX3O95076 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
ALX3O95076 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC17.76■□□□□ 0.43
ALX3O95076 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
ALX3O95076 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.76■□□□□ 0.43
ALX3O95076 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
ALX3O95076 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
ALX3O95076 AC116562.4-201ENST00000641316 2276 ntBASIC17.75■□□□□ 0.43
ALX3O95076 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
ALX3O95076 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
ALX3O95076 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
ALX3O95076 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC17.75■□□□□ 0.43
ALX3O95076 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC17.75■□□□□ 0.43
ALX3O95076 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC17.75■□□□□ 0.43
ALX3O95076 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC17.75■□□□□ 0.43
ALX3O95076 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ALX3O95076 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
ALX3O95076 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
ALX3O95076 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
ALX3O95076 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
ALX3O95076 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
ALX3O95076 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
ALX3O95076 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
ALX3O95076 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ALX3O95076 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC17.74■□□□□ 0.43
ALX3O95076 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
ALX3O95076 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
ALX3O95076 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ALX3O95076 KRT16P2-201ENST00000414673 1423 ntBASIC17.74■□□□□ 0.43
ALX3O95076 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ALX3O95076 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.74■□□□□ 0.43
ALX3O95076 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ALX3O95076 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ALX3O95076 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
ALX3O95076 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ALX3O95076 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC17.74■□□□□ 0.43
ALX3O95076 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
ALX3O95076 NT5C3AP1-201ENST00000394500 1012 ntBASIC17.74■□□□□ 0.43
ALX3O95076 AC138907.5-202ENST00000569484 235 ntBASIC17.74■□□□□ 0.43
ALX3O95076 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC17.74■□□□□ 0.43
ALX3O95076 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC17.74■□□□□ 0.43
ALX3O95076 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC17.74■□□□□ 0.43
ALX3O95076 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
ALX3O95076 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC17.74■□□□□ 0.43
ALX3O95076 KRT87P-202ENST00000534226 1464 ntBASIC17.74■□□□□ 0.43
ALX3O95076 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
ALX3O95076 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC17.74■□□□□ 0.43
ALX3O95076 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ALX3O95076 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
ALX3O95076 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ALX3O95076 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC17.74■□□□□ 0.43
ALX3O95076 AL162377.1-201ENST00000618844 1793 ntBASIC17.74■□□□□ 0.43
ALX3O95076 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC17.74■□□□□ 0.43
ALX3O95076 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ALX3O95076 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ALX3O95076 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
ALX3O95076 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
ALX3O95076 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ALX3O95076 FZD10-202ENST00000539839 3282 ntBASIC17.73■□□□□ 0.43
ALX3O95076 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
ALX3O95076 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC17.73■□□□□ 0.43
ALX3O95076 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ALX3O95076 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC17.73■□□□□ 0.43
ALX3O95076 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
ALX3O95076 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
ALX3O95076 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
ALX3O95076 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC17.73■□□□□ 0.43
ALX3O95076 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC17.73■□□□□ 0.43
ALX3O95076 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
ALX3O95076 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
ALX3O95076 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
ALX3O95076 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
ALX3O95076 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
ALX3O95076 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
ALX3O95076 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ALX3O95076 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ALX3O95076 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
ALX3O95076 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
ALX3O95076 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC17.72■□□□□ 0.43
ALX3O95076 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
ALX3O95076 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC17.72■□□□□ 0.43
ALX3O95076 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
ALX3O95076 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
ALX3O95076 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC17.72■□□□□ 0.43
ALX3O95076 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ALX3O95076 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
ALX3O95076 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms