Protein–RNA interactions for Protein: O76070

SNCG, Gamma-synuclein, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCGO76070 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
SNCGO76070 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
SNCGO76070 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC13.6□□□□□ -0.23
SNCGO76070 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC13.6□□□□□ -0.23
SNCGO76070 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
SNCGO76070 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC13.6□□□□□ -0.23
SNCGO76070 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
SNCGO76070 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SNCGO76070 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC13.6□□□□□ -0.23
SNCGO76070 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SNCGO76070 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
SNCGO76070 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SNCGO76070 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
SNCGO76070 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SNCGO76070 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
SNCGO76070 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SNCGO76070 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SNCGO76070 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SNCGO76070 GABARAPL3-202ENST00000624044 1851 ntBASIC13.59□□□□□ -0.23
SNCGO76070 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SNCGO76070 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
SNCGO76070 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SNCGO76070 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SNCGO76070 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SNCGO76070 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SNCGO76070 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
SNCGO76070 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
SNCGO76070 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
SNCGO76070 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
SNCGO76070 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC13.59□□□□□ -0.23
SNCGO76070 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SNCGO76070 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC13.59□□□□□ -0.23
SNCGO76070 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC13.59□□□□□ -0.23
SNCGO76070 LSM7-203ENST00000585409 512 ntTSL 2 BASIC13.59□□□□□ -0.23
SNCGO76070 CR559946.2-201ENST00000623684 991 ntBASIC13.59□□□□□ -0.23
SNCGO76070 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
SNCGO76070 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC13.59□□□□□ -0.23
SNCGO76070 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC13.59□□□□□ -0.23
SNCGO76070 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
SNCGO76070 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC13.59□□□□□ -0.23
SNCGO76070 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
SNCGO76070 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
SNCGO76070 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
SNCGO76070 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
SNCGO76070 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC13.59□□□□□ -0.23
SNCGO76070 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SNCGO76070 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC13.59□□□□□ -0.23
SNCGO76070 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SNCGO76070 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SNCGO76070 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SNCGO76070 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SNCGO76070 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SNCGO76070 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC13.58□□□□□ -0.23
SNCGO76070 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.23
SNCGO76070 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.23
SNCGO76070 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.23
SNCGO76070 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SNCGO76070 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SNCGO76070 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SNCGO76070 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SNCGO76070 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
SNCGO76070 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SNCGO76070 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC13.58□□□□□ -0.24
SNCGO76070 F11R-206ENST00000621309 4770 ntTSL 5 BASIC13.58□□□□□ -0.24
SNCGO76070 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
SNCGO76070 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC13.58□□□□□ -0.24
SNCGO76070 CA15P2-201ENST00000611168 834 ntBASIC13.58□□□□□ -0.24
SNCGO76070 AC022413.1-201ENST00000624602 984 ntBASIC13.58□□□□□ -0.24
SNCGO76070 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC13.58□□□□□ -0.24
SNCGO76070 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SNCGO76070 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SNCGO76070 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC13.58□□□□□ -0.24
SNCGO76070 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC13.58□□□□□ -0.24
SNCGO76070 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
SNCGO76070 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SNCGO76070 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC13.58□□□□□ -0.24
SNCGO76070 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SNCGO76070 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
SNCGO76070 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
SNCGO76070 AL133373.2-201ENST00000623187 2828 ntBASIC13.58□□□□□ -0.24
SNCGO76070 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
SNCGO76070 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
SNCGO76070 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC13.57□□□□□ -0.24
SNCGO76070 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
SNCGO76070 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
SNCGO76070 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
SNCGO76070 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
SNCGO76070 USF2-207ENST00000595068 1612 ntTSL 5 BASIC13.57□□□□□ -0.24
SNCGO76070 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC13.57□□□□□ -0.24
SNCGO76070 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
SNCGO76070 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
SNCGO76070 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
SNCGO76070 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC13.57□□□□□ -0.24
SNCGO76070 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
SNCGO76070 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SNCGO76070 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
SNCGO76070 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
SNCGO76070 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
SNCGO76070 AC087393.1-201ENST00000582896 145 ntBASIC13.57□□□□□ -0.24
SNCGO76070 GDI1-215ENST00000630693 786 ntTSL 4 BASIC13.57□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms