Protein–RNA interactions for Protein: O60810

PRAMEF4, PRAME family member 4, humanhuman

Predictions only

Length 478 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF4O60810 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
PRAMEF4O60810 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
PRAMEF4O60810 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
PRAMEF4O60810 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PRAMEF4O60810 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
PRAMEF4O60810 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
PRAMEF4O60810 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
PRAMEF4O60810 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PRAMEF4O60810 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.45■□□□□ 0.7
PRAMEF4O60810 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
PRAMEF4O60810 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.45■□□□□ 0.7
PRAMEF4O60810 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
PRAMEF4O60810 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PRAMEF4O60810 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19.44■□□□□ 0.7
PRAMEF4O60810 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PRAMEF4O60810 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PRAMEF4O60810 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PRAMEF4O60810 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC19.44■□□□□ 0.7
PRAMEF4O60810 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC19.44■□□□□ 0.7
PRAMEF4O60810 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
PRAMEF4O60810 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
PRAMEF4O60810 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
PRAMEF4O60810 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PRAMEF4O60810 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PRAMEF4O60810 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
PRAMEF4O60810 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PRAMEF4O60810 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PRAMEF4O60810 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PRAMEF4O60810 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
PRAMEF4O60810 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PRAMEF4O60810 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PRAMEF4O60810 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.43■□□□□ 0.7
PRAMEF4O60810 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PRAMEF4O60810 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
PRAMEF4O60810 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.43■□□□□ 0.7
PRAMEF4O60810 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC19.43■□□□□ 0.7
PRAMEF4O60810 METTL15-202ENST00000403099 795 ntTSL 5 BASIC19.43■□□□□ 0.7
PRAMEF4O60810 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
PRAMEF4O60810 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PRAMEF4O60810 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PRAMEF4O60810 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PRAMEF4O60810 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PRAMEF4O60810 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PRAMEF4O60810 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC19.43■□□□□ 0.7
PRAMEF4O60810 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PRAMEF4O60810 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PRAMEF4O60810 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
PRAMEF4O60810 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PRAMEF4O60810 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PRAMEF4O60810 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.42■□□□□ 0.7
PRAMEF4O60810 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PRAMEF4O60810 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.42■□□□□ 0.7
PRAMEF4O60810 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PRAMEF4O60810 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PRAMEF4O60810 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
PRAMEF4O60810 BX119927.1-201ENST00000636596 1552 ntBASIC19.42■□□□□ 0.7
PRAMEF4O60810 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PRAMEF4O60810 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC19.42■□□□□ 0.7
PRAMEF4O60810 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC19.42■□□□□ 0.7
PRAMEF4O60810 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC19.42■□□□□ 0.7
PRAMEF4O60810 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC19.42■□□□□ 0.7
PRAMEF4O60810 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PRAMEF4O60810 AC105036.2-201ENST00000569468 176 ntBASIC19.42■□□□□ 0.7
PRAMEF4O60810 AC092666.2-201ENST00000613287 246 ntBASIC19.42■□□□□ 0.7
PRAMEF4O60810 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PRAMEF4O60810 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.42■□□□□ 0.7
PRAMEF4O60810 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
PRAMEF4O60810 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC19.42■□□□□ 0.7
PRAMEF4O60810 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PRAMEF4O60810 AL691432.2-201ENST00000607222 2038 ntBASIC19.42■□□□□ 0.7
PRAMEF4O60810 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.42■□□□□ 0.7
PRAMEF4O60810 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
PRAMEF4O60810 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PRAMEF4O60810 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
PRAMEF4O60810 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PRAMEF4O60810 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PRAMEF4O60810 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
PRAMEF4O60810 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PRAMEF4O60810 AF201337.1-201ENST00000520239 748 ntBASIC19.41■□□□□ 0.7
PRAMEF4O60810 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC19.41■□□□□ 0.7
PRAMEF4O60810 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PRAMEF4O60810 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
PRAMEF4O60810 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC19.41■□□□□ 0.7
PRAMEF4O60810 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PRAMEF4O60810 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PRAMEF4O60810 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PRAMEF4O60810 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC19.4■□□□□ 0.7
PRAMEF4O60810 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC19.4■□□□□ 0.7
PRAMEF4O60810 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC19.4■□□□□ 0.7
PRAMEF4O60810 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
PRAMEF4O60810 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.4■□□□□ 0.7
PRAMEF4O60810 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.4■□□□□ 0.7
PRAMEF4O60810 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PRAMEF4O60810 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PRAMEF4O60810 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PRAMEF4O60810 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC19.4■□□□□ 0.7
PRAMEF4O60810 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC19.39■□□□□ 0.7
PRAMEF4O60810 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
PRAMEF4O60810 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC19.39■□□□□ 0.7
PRAMEF4O60810 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms