Protein–RNA interactions for Protein: O15198

SMAD9, Mothers against decapentaplegic homolog 9, humanhuman

Known RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9O15198 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
SMAD9O15198 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
SMAD9O15198 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
SMAD9O15198 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
SMAD9O15198 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
SMAD9O15198 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC18.26■□□□□ 0.51
SMAD9O15198 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC18.26■□□□□ 0.51
SMAD9O15198 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC18.26■□□□□ 0.51
SMAD9O15198 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC18.26■□□□□ 0.51
SMAD9O15198 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC18.26■□□□□ 0.51
SMAD9O15198 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
SMAD9O15198 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC18.26■□□□□ 0.51
SMAD9O15198 PFKL-212ENST00000628044 129 ntTSL 3 BASIC18.26■□□□□ 0.51
SMAD9O15198 MIR2861-201ENST00000636310 90 ntBASIC18.26■□□□□ 0.51
SMAD9O15198 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SMAD9O15198 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
SMAD9O15198 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
SMAD9O15198 KRT17P1-201ENST00000399211 1546 ntBASIC18.26■□□□□ 0.51
SMAD9O15198 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
SMAD9O15198 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
SMAD9O15198 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SMAD9O15198 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SMAD9O15198 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SMAD9O15198 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SMAD9O15198 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SMAD9O15198 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SMAD9O15198 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SMAD9O15198 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
SMAD9O15198 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SMAD9O15198 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SMAD9O15198 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SMAD9O15198 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC18.25■□□□□ 0.51
SMAD9O15198 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC18.25■□□□□ 0.51
SMAD9O15198 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SMAD9O15198 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC18.25■□□□□ 0.51
SMAD9O15198 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SMAD9O15198 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SMAD9O15198 KRT18P68-201ENST00000392293 1000 ntBASIC18.25■□□□□ 0.51
SMAD9O15198 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SMAD9O15198 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SMAD9O15198 AL138781.1-201ENST00000566567 1274 ntBASIC18.25■□□□□ 0.51
SMAD9O15198 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
SMAD9O15198 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC18.25■□□□□ 0.51
SMAD9O15198 GCK-205ENST00000437084 1385 ntTSL 5 BASIC18.25■□□□□ 0.51
SMAD9O15198 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC18.25■□□□□ 0.51
SMAD9O15198 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC18.25■□□□□ 0.51
SMAD9O15198 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC18.25■□□□□ 0.51
SMAD9O15198 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SMAD9O15198 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SMAD9O15198 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SMAD9O15198 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SMAD9O15198 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC18.24■□□□□ 0.51
SMAD9O15198 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
SMAD9O15198 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
SMAD9O15198 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SMAD9O15198 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC18.24■□□□□ 0.51
SMAD9O15198 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SMAD9O15198 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SMAD9O15198 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC18.24■□□□□ 0.51
SMAD9O15198 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC18.24■□□□□ 0.51
SMAD9O15198 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC18.24■□□□□ 0.51
SMAD9O15198 AL355802.2-201ENST00000402069 882 ntBASIC18.24■□□□□ 0.51
SMAD9O15198 PGM5P4-201ENST00000421970 445 ntBASIC18.24■□□□□ 0.51
SMAD9O15198 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC18.24■□□□□ 0.51
SMAD9O15198 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC18.24■□□□□ 0.51
SMAD9O15198 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SMAD9O15198 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SMAD9O15198 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC18.24■□□□□ 0.51
SMAD9O15198 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC18.24■□□□□ 0.51
SMAD9O15198 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
SMAD9O15198 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SMAD9O15198 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
SMAD9O15198 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
SMAD9O15198 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SMAD9O15198 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SMAD9O15198 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC18.23■□□□□ 0.51
SMAD9O15198 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
SMAD9O15198 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SMAD9O15198 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC18.23■□□□□ 0.51
SMAD9O15198 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SMAD9O15198 AC142086.2-201ENST00000569753 217 ntBASIC18.23■□□□□ 0.51
SMAD9O15198 AL356652.1-201ENST00000615962 565 ntBASIC18.23■□□□□ 0.51
SMAD9O15198 AL589743.5-201ENST00000616611 1050 ntBASIC18.23■□□□□ 0.51
SMAD9O15198 AC105020.6-201ENST00000621523 1217 ntBASIC18.23■□□□□ 0.51
SMAD9O15198 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SMAD9O15198 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SMAD9O15198 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
SMAD9O15198 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SMAD9O15198 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SMAD9O15198 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SMAD9O15198 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SMAD9O15198 FP700111.2-201ENST00000619190 1892 ntBASIC18.22■□□□□ 0.51
SMAD9O15198 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
SMAD9O15198 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
SMAD9O15198 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC18.22■□□□□ 0.51
SMAD9O15198 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SMAD9O15198 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SMAD9O15198 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC18.22■□□□□ 0.51
SMAD9O15198 LSM12P1-201ENST00000411836 588 ntBASIC18.22■□□□□ 0.51
SMAD9O15198 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms