Protein–RNA interactions for Protein: O13527

TY1B-A, Truncated transposon Ty1-A Gag-Pol polyprotein, yeastyeast

Known RBP Predictions only

Length 1,196 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-AO13527 LAA1YJL207C 6045 nt1.68□□□□□ -2.14
TY1B-AO13527 YDL011CYDL011C 324 nt1.67□□□□□ -2.14
TY1B-AO13527 RTT102YGR275W 474 nt1.67□□□□□ -2.14
TY1B-AO13527 UBC7YMR022W 498 nt1.67□□□□□ -2.14
TY1B-AO13527 MAK10YEL053C 2202 nt1.67□□□□□ -2.14
TY1B-AO13527 YPR012WYPR012W 255 nt1.66□□□□□ -2.14
TY1B-AO13527 HDA3YPR179C 1968 nt1.66□□□□□ -2.14
TY1B-AO13527 SPC110YDR356W 2835 nt1.66□□□□□ -2.14
TY1B-AO13527 HMI1YOL095C 2121 nt1.66□□□□□ -2.14
TY1B-AO13527 YNL284C-BYNL284C-B 5268 nt1.66□□□□□ -2.14
TY1B-AO13527 SWF1YDR126W 1011 nt1.65□□□□□ -2.15
TY1B-AO13527 MCM22YJR135C 720 nt1.65□□□□□ -2.15
TY1B-AO13527 RPS27AYKL156W 249 nt1.65□□□□□ -2.15
TY1B-AO13527 YOL159CYOL159C 516 nt1.65□□□□□ -2.15
TY1B-AO13527 RLM1YPL089C 2031 nt1.65□□□□□ -2.15
TY1B-AO13527 YLR146W-AYLR146W-A 189 nt1.64□□□□□ -2.15
TY1B-AO13527 SEC21YNL287W 2808 nt1.64□□□□□ -2.15
TY1B-AO13527 YGR130CYGR130C 2451 nt1.64□□□□□ -2.15
TY1B-AO13527 SWI5YDR146C 2130 nt1.64□□□□□ -2.15
TY1B-AO13527 HIR3YJR140C 4947 nt1.64□□□□□ -2.15
TY1B-AO13527 CCH1YGR217W 6120 nt1.63□□□□□ -2.15
TY1B-AO13527 ATG31YDR022C 591 nt1.63□□□□□ -2.15
TY1B-AO13527 TIM13YGR181W 318 nt1.63□□□□□ -2.15
TY1B-AO13527 YHR138CYHR138C 345 nt1.63□□□□□ -2.15
TY1B-AO13527 PAU18YLL064C 363 nt1.63□□□□□ -2.15
TY1B-AO13527 PAU6YNR076W 363 nt1.63□□□□□ -2.15
TY1B-AO13527 HHT1YBR010W 411 nt1.63□□□□□ -2.15
TY1B-AO13527 ZRG17YNR039C 1818 nt1.63□□□□□ -2.15
TY1B-AO13527 YOR343W-BYOR343W-B 5313 nt1.63□□□□□ -2.15
TY1B-AO13527 MSH5YDL154W 2706 nt1.62□□□□□ -2.15
TY1B-AO13527 YDR524W-CYDR524W-C 90 nt1.62□□□□□ -2.15
TY1B-AO13527 RPL9BYNL067W 576 nt1.62□□□□□ -2.15
TY1B-AO13527 RPL32YBL092W 393 nt1.62□□□□□ -2.15
TY1B-AO13527 OSH6YKR003W 1347 nt1.62□□□□□ -2.15
TY1B-AO13527 SWI6YLR182W 2412 nt1.61□□□□□ -2.15
TY1B-AO13527 YBR285WYBR285W 435 nt1.61□□□□□ -2.15
TY1B-AO13527 VPS15YBR097W 4365 nt1.61□□□□□ -2.15
TY1B-AO13527 HKR1YDR420W 5409 nt1.61□□□□□ -2.15
TY1B-AO13527 tQ(UUG)E2tQ(UUG)E2 72 nt1.6□□□□□ -2.15
TY1B-AO13527 PHS1YJL097W 654 nt1.6□□□□□ -2.15
TY1B-AO13527 YAR047CYAR047C 321 nt1.6□□□□□ -2.15
TY1B-AO13527 YOR053WYOR053W 342 nt1.6□□□□□ -2.15
TY1B-AO13527 YCL046WYCL046W 324 nt1.6□□□□□ -2.15
TY1B-AO13527 AIM9YER080W 1884 nt1.6□□□□□ -2.15
TY1B-AO13527 YJL020W-AYJL020W-A 258 nt1.59□□□□□ -2.15
TY1B-AO13527 POL5YEL055C 3069 nt1.58□□□□□ -2.16
TY1B-AO13527 IML1YJR138W 4755 nt1.58□□□□□ -2.16
TY1B-AO13527 WIP1YDR374W-A 270 nt1.58□□□□□ -2.16
TY1B-AO13527 STF2YGR008C 255 nt1.58□□□□□ -2.16
TY1B-AO13527 YJL015CYJL015C 285 nt1.58□□□□□ -2.16
TY1B-AO13527 YLR140WYLR140W 327 nt1.58□□□□□ -2.16
TY1B-AO13527 YLR434CYLR434C 384 nt1.58□□□□□ -2.16
TY1B-AO13527 YML003WYML003W 873 nt1.58□□□□□ -2.16
TY1B-AO13527 YPL229WYPL229W 621 nt1.58□□□□□ -2.16
TY1B-AO13527 MLH3YPL164C 2148 nt1.58□□□□□ -2.16
TY1B-AO13527 NCA2YPR155C 1851 nt1.58□□□□□ -2.16
TY1B-AO13527 SPC98YNL126W 2541 nt1.58□□□□□ -2.16
TY1B-AO13527 PXA2YKL188C 2562 nt1.57□□□□□ -2.16
TY1B-AO13527 BUD3YCL014W 4911 nt1.57□□□□□ -2.16
TY1B-AO13527 ZIP1YDR285W 2628 nt1.57□□□□□ -2.16
TY1B-AO13527 RTR1YER139C 681 nt1.57□□□□□ -2.16
TY1B-AO13527 YIL059CYIL059C 366 nt1.57□□□□□ -2.16
TY1B-AO13527 YAL068W-AYAL068W-A 255 nt1.57□□□□□ -2.16
TY1B-AO13527 BSC3YLR465C 309 nt1.57□□□□□ -2.16
TY1B-AO13527 MSN5YDR335W 3675 nt1.57□□□□□ -2.16
TY1B-AO13527 YBP1YBR216C 2025 nt1.56□□□□□ -2.16
TY1B-AO13527 RSM22YKL155C 1887 nt1.56□□□□□ -2.16
TY1B-AO13527 CLU1YMR012W 3834 nt1.55□□□□□ -2.16
TY1B-AO13527 EFR3YMR212C 2349 nt1.55□□□□□ -2.16
TY1B-AO13527 LYS14YDR034C 2373 nt1.55□□□□□ -2.16
TY1B-AO13527 YBR012CYBR012C 420 nt1.55□□□□□ -2.16
TY1B-AO13527 YOP1YPR028W 543 nt1.55□□□□□ -2.16
TY1B-AO13527 SLY1YDR189W 2001 nt1.54□□□□□ -2.16
TY1B-AO13527 BPH1YCR032W 6504 nt1.54□□□□□ -2.16
TY1B-AO13527 YDR003W-AYDR003W-A 123 nt1.54□□□□□ -2.16
TY1B-AO13527 YER137W-AYER137W-A 306 nt1.54□□□□□ -2.16
TY1B-AO13527 YGR174W-AYGR174W-A 87 nt1.54□□□□□ -2.16
TY1B-AO13527 EST2YLR318W 2655 nt1.54□□□□□ -2.16
TY1B-AO13527 YAP6YDR259C 1152 nt1.53□□□□□ -2.16
TY1B-AO13527 YGR109W-BYGR109W-B 4644 nt1.53□□□□□ -2.16
TY1B-AO13527 HIT1YJR055W 495 nt1.53□□□□□ -2.16
TY1B-AO13527 RFX1YLR176C 2436 nt1.53□□□□□ -2.16
TY1B-AO13527 HUG1YML058W-A 207 nt1.53□□□□□ -2.16
TY1B-AO13527 PCF11YDR228C 1881 nt1.52□□□□□ -2.17
TY1B-AO13527 DGR2YKL121W 2559 nt1.52□□□□□ -2.17
TY1B-AO13527 YIL020C-AYIL020C-A 339 nt1.52□□□□□ -2.17
TY1B-AO13527 YKL083WYKL083W 615 nt1.52□□□□□ -2.17
TY1B-AO13527 EMC5YIL027C 426 nt1.51□□□□□ -2.17
TY1B-AO13527 YOR029WYOR029W 336 nt1.51□□□□□ -2.17
TY1B-AO13527 RAD9YDR217C 3930 nt1.51□□□□□ -2.17
TY1B-AO13527 YCS4YLR272C 3531 nt1.5□□□□□ -2.17
TY1B-AO13527 tH(GUG)E1tH(GUG)E1 72 nt1.5□□□□□ -2.17
TY1B-AO13527 tH(GUG)E2tH(GUG)E2 72 nt1.5□□□□□ -2.17
TY1B-AO13527 tH(GUG)G1tH(GUG)G1 72 nt1.5□□□□□ -2.17
TY1B-AO13527 tH(GUG)G2tH(GUG)G2 72 nt1.5□□□□□ -2.17
TY1B-AO13527 tH(GUG)HtH(GUG)H 72 nt1.5□□□□□ -2.17
TY1B-AO13527 tH(GUG)KtH(GUG)K 72 nt1.5□□□□□ -2.17
TY1B-AO13527 tH(GUG)MtH(GUG)M 72 nt1.5□□□□□ -2.17
TY1B-AO13527 YHL046W-AYHL046W-A 327 nt1.5□□□□□ -2.17
TY1B-AO13527 RPL26AYLR344W 384 nt1.5□□□□□ -2.17
Retrieved 100 of 7,029 protein–RNA pairs in 26.9 ms