Protein–RNA interactions for Protein: A6NLX3

SPDYE4, Speedy protein E4, humanhuman

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE4A6NLX3 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SPDYE4A6NLX3 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC22.56■■□□□ 1.2
SPDYE4A6NLX3 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
SPDYE4A6NLX3 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC22.56■■□□□ 1.2
SPDYE4A6NLX3 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
SPDYE4A6NLX3 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
SPDYE4A6NLX3 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
SPDYE4A6NLX3 AC018445.3-201ENST00000624177 1945 ntBASIC22.55■■□□□ 1.2
SPDYE4A6NLX3 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SPDYE4A6NLX3 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SPDYE4A6NLX3 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC22.55■■□□□ 1.2
SPDYE4A6NLX3 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC22.55■■□□□ 1.2
SPDYE4A6NLX3 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
SPDYE4A6NLX3 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC22.55■■□□□ 1.2
SPDYE4A6NLX3 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
SPDYE4A6NLX3 RNA5SP413-201ENST00000516373 109 ntBASIC22.55■■□□□ 1.2
SPDYE4A6NLX3 MIR4758-201ENST00000577688 71 ntBASIC22.55■■□□□ 1.2
SPDYE4A6NLX3 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
SPDYE4A6NLX3 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC22.55■■□□□ 1.2
SPDYE4A6NLX3 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
SPDYE4A6NLX3 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SPDYE4A6NLX3 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
SPDYE4A6NLX3 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SPDYE4A6NLX3 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC22.55■■□□□ 1.2
SPDYE4A6NLX3 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
SPDYE4A6NLX3 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SPDYE4A6NLX3 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
SPDYE4A6NLX3 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC22.54■■□□□ 1.2
SPDYE4A6NLX3 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC22.54■■□□□ 1.2
SPDYE4A6NLX3 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SPDYE4A6NLX3 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
SPDYE4A6NLX3 APTR-203ENST00000430801 583 ntTSL 5 BASIC22.54■■□□□ 1.2
SPDYE4A6NLX3 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
SPDYE4A6NLX3 PHB2-213ENST00000546111 858 ntTSL 2 BASIC22.54■■□□□ 1.2
SPDYE4A6NLX3 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
SPDYE4A6NLX3 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
SPDYE4A6NLX3 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
SPDYE4A6NLX3 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
SPDYE4A6NLX3 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC22.54■■□□□ 1.2
SPDYE4A6NLX3 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SPDYE4A6NLX3 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
SPDYE4A6NLX3 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SPDYE4A6NLX3 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC22.54■■□□□ 1.2
SPDYE4A6NLX3 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC22.54■■□□□ 1.2
SPDYE4A6NLX3 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SPDYE4A6NLX3 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC22.53■■□□□ 1.2
SPDYE4A6NLX3 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC22.53■■□□□ 1.2
SPDYE4A6NLX3 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SPDYE4A6NLX3 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SPDYE4A6NLX3 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
SPDYE4A6NLX3 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SPDYE4A6NLX3 MKRN4P-201ENST00000444706 1521 ntBASIC22.53■■□□□ 1.2
SPDYE4A6NLX3 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
SPDYE4A6NLX3 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC22.53■■□□□ 1.2
SPDYE4A6NLX3 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC22.53■■□□□ 1.2
SPDYE4A6NLX3 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC22.53■■□□□ 1.2
SPDYE4A6NLX3 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SPDYE4A6NLX3 AC098934.4-201ENST00000564127 592 ntBASIC22.53■■□□□ 1.2
SPDYE4A6NLX3 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC22.53■■□□□ 1.2
SPDYE4A6NLX3 AC120498.10-201ENST00000621827 505 ntBASIC22.53■■□□□ 1.2
SPDYE4A6NLX3 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SPDYE4A6NLX3 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC22.53■■□□□ 1.2
SPDYE4A6NLX3 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC22.53■■□□□ 1.2
SPDYE4A6NLX3 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SPDYE4A6NLX3 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
SPDYE4A6NLX3 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SPDYE4A6NLX3 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SPDYE4A6NLX3 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SPDYE4A6NLX3 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
SPDYE4A6NLX3 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC22.52■■□□□ 1.2
SPDYE4A6NLX3 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
SPDYE4A6NLX3 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
SPDYE4A6NLX3 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
SPDYE4A6NLX3 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
SPDYE4A6NLX3 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
SPDYE4A6NLX3 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
SPDYE4A6NLX3 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
SPDYE4A6NLX3 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
SPDYE4A6NLX3 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC22.52■■□□□ 1.2
SPDYE4A6NLX3 CYP2T1P-201ENST00000432607 1285 ntBASIC22.52■■□□□ 1.2
SPDYE4A6NLX3 TERF1P5-201ENST00000477545 1207 ntBASIC22.52■■□□□ 1.2
SPDYE4A6NLX3 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC22.52■■□□□ 1.2
SPDYE4A6NLX3 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC22.52■■□□□ 1.2
SPDYE4A6NLX3 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
SPDYE4A6NLX3 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
SPDYE4A6NLX3 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
SPDYE4A6NLX3 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
SPDYE4A6NLX3 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
SPDYE4A6NLX3 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC22.52■■□□□ 1.2
SPDYE4A6NLX3 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC22.52■■□□□ 1.2
SPDYE4A6NLX3 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
SPDYE4A6NLX3 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
SPDYE4A6NLX3 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
SPDYE4A6NLX3 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC22.51■■□□□ 1.19
SPDYE4A6NLX3 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
SPDYE4A6NLX3 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC22.51■■□□□ 1.19
SPDYE4A6NLX3 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC22.51■■□□□ 1.19
SPDYE4A6NLX3 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
SPDYE4A6NLX3 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
SPDYE4A6NLX3 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms