Protein–RNA interactions for Protein: A6NDR6

MEIS3P1, Putative homeobox protein Meis3-like 1, humanhuman

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3P1A6NDR6 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MEIS3P1A6NDR6 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC17.26■□□□□ 0.35
MEIS3P1A6NDR6 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
MEIS3P1A6NDR6 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MEIS3P1A6NDR6 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
MEIS3P1A6NDR6 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MEIS3P1A6NDR6 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
MEIS3P1A6NDR6 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MEIS3P1A6NDR6 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
MEIS3P1A6NDR6 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MEIS3P1A6NDR6 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
MEIS3P1A6NDR6 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC17.26■□□□□ 0.35
MEIS3P1A6NDR6 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC17.26■□□□□ 0.35
MEIS3P1A6NDR6 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MEIS3P1A6NDR6 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC17.26■□□□□ 0.35
MEIS3P1A6NDR6 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
MEIS3P1A6NDR6 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
MEIS3P1A6NDR6 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
MEIS3P1A6NDR6 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
MEIS3P1A6NDR6 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
MEIS3P1A6NDR6 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
MEIS3P1A6NDR6 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
MEIS3P1A6NDR6 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC17.25■□□□□ 0.35
MEIS3P1A6NDR6 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
MEIS3P1A6NDR6 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
MEIS3P1A6NDR6 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
MEIS3P1A6NDR6 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
MEIS3P1A6NDR6 BX842568.3-201ENST00000418104 571 ntBASIC17.25■□□□□ 0.35
MEIS3P1A6NDR6 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
MEIS3P1A6NDR6 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC17.25■□□□□ 0.35
MEIS3P1A6NDR6 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC17.25■□□□□ 0.35
MEIS3P1A6NDR6 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC17.25■□□□□ 0.35
MEIS3P1A6NDR6 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
MEIS3P1A6NDR6 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
MEIS3P1A6NDR6 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
MEIS3P1A6NDR6 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
MEIS3P1A6NDR6 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
MEIS3P1A6NDR6 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
MEIS3P1A6NDR6 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
MEIS3P1A6NDR6 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
MEIS3P1A6NDR6 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
MEIS3P1A6NDR6 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC17.24■□□□□ 0.35
MEIS3P1A6NDR6 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
MEIS3P1A6NDR6 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
MEIS3P1A6NDR6 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.24■□□□□ 0.35
MEIS3P1A6NDR6 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
MEIS3P1A6NDR6 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
MEIS3P1A6NDR6 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
MEIS3P1A6NDR6 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
MEIS3P1A6NDR6 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
MEIS3P1A6NDR6 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
MEIS3P1A6NDR6 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
MEIS3P1A6NDR6 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
MEIS3P1A6NDR6 MIR4767-201ENST00000582827 78 ntBASIC17.24■□□□□ 0.35
MEIS3P1A6NDR6 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
MEIS3P1A6NDR6 AC105233.4-201ENST00000642045 216 ntBASIC17.24■□□□□ 0.35
MEIS3P1A6NDR6 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
MEIS3P1A6NDR6 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC17.24■□□□□ 0.35
MEIS3P1A6NDR6 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
MEIS3P1A6NDR6 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
MEIS3P1A6NDR6 AC005332.7-201ENST00000614046 2005 ntBASIC17.24■□□□□ 0.35
MEIS3P1A6NDR6 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
MEIS3P1A6NDR6 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
MEIS3P1A6NDR6 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
MEIS3P1A6NDR6 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
MEIS3P1A6NDR6 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC17.24■□□□□ 0.35
MEIS3P1A6NDR6 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
MEIS3P1A6NDR6 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC17.24■□□□□ 0.35
MEIS3P1A6NDR6 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC17.24■□□□□ 0.35
MEIS3P1A6NDR6 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
MEIS3P1A6NDR6 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
MEIS3P1A6NDR6 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
MEIS3P1A6NDR6 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
MEIS3P1A6NDR6 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
MEIS3P1A6NDR6 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
MEIS3P1A6NDR6 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC17.23■□□□□ 0.35
MEIS3P1A6NDR6 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
MEIS3P1A6NDR6 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
MEIS3P1A6NDR6 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
MEIS3P1A6NDR6 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
MEIS3P1A6NDR6 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
MEIS3P1A6NDR6 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC17.23■□□□□ 0.35
MEIS3P1A6NDR6 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC17.23■□□□□ 0.35
MEIS3P1A6NDR6 IGHV3-19-201ENST00000521488 291 ntBASIC17.23■□□□□ 0.35
MEIS3P1A6NDR6 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
MEIS3P1A6NDR6 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC17.23■□□□□ 0.35
MEIS3P1A6NDR6 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.23■□□□□ 0.35
MEIS3P1A6NDR6 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC17.23■□□□□ 0.35
MEIS3P1A6NDR6 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
MEIS3P1A6NDR6 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
MEIS3P1A6NDR6 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
MEIS3P1A6NDR6 POLI-202ENST00000406285 2030 ntTSL 2 BASIC17.23■□□□□ 0.35
MEIS3P1A6NDR6 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
MEIS3P1A6NDR6 AL691432.2-201ENST00000607222 2038 ntBASIC17.23■□□□□ 0.35
MEIS3P1A6NDR6 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
MEIS3P1A6NDR6 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
MEIS3P1A6NDR6 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
MEIS3P1A6NDR6 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC17.23■□□□□ 0.35
MEIS3P1A6NDR6 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
MEIS3P1A6NDR6 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 9.5 ms