Protein–RNA interactions for Protein: A0A0A6YYJ7

TRAV8-3, T-cell receptor alpha variable 8-3 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-3A0A0A6YYJ7 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC14.26□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 AC020907.5-201ENST00000624372 1936 ntBASIC14.26□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC14.26□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC14.26□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 KRT19P1-201ENST00000405746 1186 ntBASIC14.26□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 AC026271.2-201ENST00000428091 497 ntBASIC14.26□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC14.26□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC14.26□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC14.26□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC14.26□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 AC087623.3-201ENST00000607047 1098 ntBASIC14.26□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC14.26□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC14.26□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC14.25□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC14.25□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC14.25□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC14.25□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC14.25□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 AC053503.5-201ENST00000601508 636 ntBASIC14.25□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC14.25□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC14.25□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC14.25□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC14.25□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC14.24□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC14.24□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC14.24□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC14.24□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 GALNS-213ENST00000569433 723 ntTSL 3 BASIC14.24□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 AC008175.2-201ENST00000612840 297 ntBASIC14.24□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 AC120498.10-201ENST00000621827 505 ntBASIC14.24□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC14.24□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC14.24□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC14.24□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC14.24□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC14.24□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC14.23□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms