Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TRAV18A0A075B6X5 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TRAV18A0A075B6X5 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC17.32■□□□□ 0.36
TRAV18A0A075B6X5 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
TRAV18A0A075B6X5 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRAV18A0A075B6X5 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
TRAV18A0A075B6X5 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.32■□□□□ 0.36
TRAV18A0A075B6X5 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
TRAV18A0A075B6X5 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRAV18A0A075B6X5 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRAV18A0A075B6X5 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRAV18A0A075B6X5 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRAV18A0A075B6X5 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRAV18A0A075B6X5 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRAV18A0A075B6X5 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRAV18A0A075B6X5 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRAV18A0A075B6X5 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
TRAV18A0A075B6X5 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRAV18A0A075B6X5 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRAV18A0A075B6X5 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
TRAV18A0A075B6X5 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRAV18A0A075B6X5 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC17.31■□□□□ 0.36
TRAV18A0A075B6X5 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC17.31■□□□□ 0.36
TRAV18A0A075B6X5 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
TRAV18A0A075B6X5 TMEM179-206ENST00000616017 1645 ntBASIC17.31■□□□□ 0.36
TRAV18A0A075B6X5 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
TRAV18A0A075B6X5 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRAV18A0A075B6X5 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRAV18A0A075B6X5 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRAV18A0A075B6X5 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRAV18A0A075B6X5 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRAV18A0A075B6X5 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRAV18A0A075B6X5 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRAV18A0A075B6X5 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC17.31■□□□□ 0.36
TRAV18A0A075B6X5 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRAV18A0A075B6X5 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC17.31■□□□□ 0.36
TRAV18A0A075B6X5 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRAV18A0A075B6X5 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRAV18A0A075B6X5 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRAV18A0A075B6X5 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC17.3■□□□□ 0.36
TRAV18A0A075B6X5 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC17.3■□□□□ 0.36
TRAV18A0A075B6X5 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRAV18A0A075B6X5 POLI-202ENST00000406285 2030 ntTSL 2 BASIC17.3■□□□□ 0.36
TRAV18A0A075B6X5 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC17.3■□□□□ 0.36
TRAV18A0A075B6X5 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC17.3■□□□□ 0.36
TRAV18A0A075B6X5 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
TRAV18A0A075B6X5 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRAV18A0A075B6X5 MFF-208ENST00000409616 1247 ntTSL 5 BASIC17.3■□□□□ 0.36
TRAV18A0A075B6X5 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
TRAV18A0A075B6X5 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TRAV18A0A075B6X5 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC17.3■□□□□ 0.36
TRAV18A0A075B6X5 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC17.3■□□□□ 0.36
TRAV18A0A075B6X5 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
TRAV18A0A075B6X5 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC17.3■□□□□ 0.36
TRAV18A0A075B6X5 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC17.3■□□□□ 0.36
TRAV18A0A075B6X5 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRAV18A0A075B6X5 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TRAV18A0A075B6X5 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC17.3■□□□□ 0.36
TRAV18A0A075B6X5 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC17.3■□□□□ 0.36
TRAV18A0A075B6X5 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC17.3■□□□□ 0.36
TRAV18A0A075B6X5 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.29■□□□□ 0.36
TRAV18A0A075B6X5 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
TRAV18A0A075B6X5 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
TRAV18A0A075B6X5 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC17.29■□□□□ 0.36
TRAV18A0A075B6X5 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV18A0A075B6X5 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV18A0A075B6X5 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV18A0A075B6X5 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV18A0A075B6X5 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
TRAV18A0A075B6X5 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV18A0A075B6X5 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV18A0A075B6X5 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV18A0A075B6X5 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC17.29■□□□□ 0.36
TRAV18A0A075B6X5 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC17.29■□□□□ 0.36
TRAV18A0A075B6X5 AC008175.2-201ENST00000612840 297 ntBASIC17.29■□□□□ 0.36
TRAV18A0A075B6X5 RARRES2P11-201ENST00000635158 484 ntBASIC17.29■□□□□ 0.36
TRAV18A0A075B6X5 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV18A0A075B6X5 MFF-207ENST00000409565 1548 ntTSL 2 BASIC17.29■□□□□ 0.36
TRAV18A0A075B6X5 AL691432.2-201ENST00000607222 2038 ntBASIC17.29■□□□□ 0.36
TRAV18A0A075B6X5 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
TRAV18A0A075B6X5 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC17.29■□□□□ 0.36
TRAV18A0A075B6X5 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV18A0A075B6X5 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV18A0A075B6X5 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
TRAV18A0A075B6X5 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV18A0A075B6X5 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC17.28■□□□□ 0.36
TRAV18A0A075B6X5 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
TRAV18A0A075B6X5 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV18A0A075B6X5 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV18A0A075B6X5 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV18A0A075B6X5 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV18A0A075B6X5 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC17.28■□□□□ 0.36
TRAV18A0A075B6X5 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV18A0A075B6X5 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC17.28■□□□□ 0.36
TRAV18A0A075B6X5 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV18A0A075B6X5 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
TRAV18A0A075B6X5 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC17.28■□□□□ 0.36
TRAV18A0A075B6X5 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV18A0A075B6X5 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC17.28■□□□□ 0.36
TRAV18A0A075B6X5 POU5F1P4-201ENST00000413175 1085 ntBASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms