Protein–RNA interactions for Protein: Q6P2Q9

PRPF8, Pre-mRNA-processing-splicing factor 8, humanhuman

Known RBP eCLIP

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8Q6P2Q9 MAP3K4-213ENST00000542952 629 ntTSL 413.15□□□□□ -0.31e-10■■□□□ 12.6
PRPF8Q6P2Q9 LINC00969-201ENST00000414625 729 ntTSL 513.14□□□□□ -0.319e-6■■□□□ 12.6
PRPF8Q6P2Q9 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC13.11□□□□□ -0.319e-6■■□□□ 12.6
PRPF8Q6P2Q9 SSH1-204ENST00000546697 583 ntTSL 313.11□□□□□ -0.319e-6■■□□□ 12.6
PRPF8Q6P2Q9 ZNF714-207ENST00000616183 577 ntTSL 413.1□□□□□ -0.319e-6■■□□□ 12.6
PRPF8Q6P2Q9 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC13.09□□□□□ -0.313e-8■■□□□ 12.6
PRPF8Q6P2Q9 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC13.07□□□□□ -0.329e-6■■□□□ 12.6
PRPF8Q6P2Q9 XRCC1-205ENST00000595789 1147 ntTSL 313.06□□□□□ -0.329e-6■■□□□ 12.6
PRPF8Q6P2Q9 YIPF6-206ENST00000470730 2267 ntTSL 213.06□□□□□ -0.329e-6■■□□□ 12.6
PRPF8Q6P2Q9 CPTP-203ENST00000488011 783 ntTSL 212.99□□□□□ -0.339e-6■■□□□ 12.6
PRPF8Q6P2Q9 AHSA1-213ENST00000557476 584 ntTSL 312.98□□□□□ -0.339e-6■■□□□ 12.6
PRPF8Q6P2Q9 ZDHHC7-204ENST00000564526 603 ntTSL 212.91□□□□□ -0.349e-6■■□□□ 12.6
PRPF8Q6P2Q9 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.349e-6■■□□□ 12.6
PRPF8Q6P2Q9 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.349e-6■■□□□ 12.6
PRPF8Q6P2Q9 SART1-208ENST00000533386 586 ntTSL 212.87□□□□□ -0.359e-6■■□□□ 12.6
PRPF8Q6P2Q9 MAPK7-212ENST00000572853 564 ntTSL 212.82□□□□□ -0.369e-6■■□□□ 12.6
PRPF8Q6P2Q9 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC12.77□□□□□ -0.369e-6■■□□□ 12.6
PRPF8Q6P2Q9 PTP4A2-209ENST00000526960 793 ntTSL 512.75□□□□□ -0.378e-12■■□□□ 12.6
PRPF8Q6P2Q9 MAPK7-215ENST00000573466 661 ntTSL 212.74□□□□□ -0.379e-6■■□□□ 12.6
PRPF8Q6P2Q9 ZNF101-201ENST00000318110 1830 ntTSL 512.73□□□□□ -0.379e-6■■□□□ 12.6
PRPF8Q6P2Q9 MKLN1-AS-204ENST00000447514 578 ntTSL 412.72□□□□□ -0.379e-6■■□□□ 12.6
PRPF8Q6P2Q9 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC12.71□□□□□ -0.379e-6■■□□□ 12.6
PRPF8Q6P2Q9 B4GALT7-207ENST00000510761 552 ntTSL 312.68□□□□□ -0.389e-6■■□□□ 12.6
PRPF8Q6P2Q9 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC12.66□□□□□ -0.389e-6■■□□□ 12.6
PRPF8Q6P2Q9 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.399e-6■■□□□ 12.6
PRPF8Q6P2Q9 CCNF-204ENST00000564333 1937 nt12.62□□□□□ -0.399e-6■■□□□ 12.6
PRPF8Q6P2Q9 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.43e-18■■□□□ 12.6
PRPF8Q6P2Q9 SNAPC2-204ENST00000595637 975 ntTSL 212.55□□□□□ -0.49e-6■■□□□ 12.6
PRPF8Q6P2Q9 LINC00969-242ENST00000601648 745 ntTSL 312.55□□□□□ -0.49e-6■■□□□ 12.6
PRPF8Q6P2Q9 LINC00969-244ENST00000602127 749 ntTSL 512.55□□□□□ -0.49e-6■■□□□ 12.6
PRPF8Q6P2Q9 POMT2-217ENST00000556446 556 ntTSL 412.55□□□□□ -0.49e-6■■□□□ 12.6
PRPF8Q6P2Q9 OGFOD3-210ENST00000582593 385 ntTSL 312.54□□□□□ -0.49e-6■■□□□ 12.6
PRPF8Q6P2Q9 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC12.52□□□□□ -0.419e-6■■□□□ 12.6
PRPF8Q6P2Q9 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.419e-6■■□□□ 12.6
PRPF8Q6P2Q9 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC12.46□□□□□ -0.419e-6■■□□□ 12.6
PRPF8Q6P2Q9 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC12.45□□□□□ -0.429e-6■■□□□ 12.6
PRPF8Q6P2Q9 TPT1-AS1-208ENST00000520432 897 ntTSL 312.45□□□□□ -0.429e-6■■□□□ 12.6
PRPF8Q6P2Q9 PAF1-206ENST00000597365 606 ntTSL 212.45□□□□□ -0.428e-12■■□□□ 12.6
PRPF8Q6P2Q9 UBE2I-209ENST00000562470 433 ntTSL 212.38□□□□□ -0.433e-8■■□□□ 12.6
PRPF8Q6P2Q9 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC12.38□□□□□ -0.439e-6■■□□□ 12.6
PRPF8Q6P2Q9 ZNF232-206ENST00000574735 1907 ntTSL 212.32□□□□□ -0.443e-8■■□□□ 12.6
PRPF8Q6P2Q9 PTOV1-AS2-202ENST00000599259 516 ntTSL 212.29□□□□□ -0.444e-6■■□□□ 12.6
PRPF8Q6P2Q9 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC12.27□□□□□ -0.459e-6■■□□□ 12.6
PRPF8Q6P2Q9 SLC27A5-204ENST00000594786 643 ntTSL 2 BASIC12.17□□□□□ -0.469e-6■■□□□ 12.6
PRPF8Q6P2Q9 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.469e-6■■□□□ 12.6
PRPF8Q6P2Q9 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.479e-6■■□□□ 12.6
PRPF8Q6P2Q9 ZNF232-202ENST00000570486 2384 ntTSL 512.11□□□□□ -0.473e-8■■□□□ 12.6
PRPF8Q6P2Q9 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC12.07□□□□□ -0.489e-6■■□□□ 12.6
PRPF8Q6P2Q9 LIG1-208ENST00000595758 606 ntTSL 412.01□□□□□ -0.499e-6■■□□□ 12.6
PRPF8Q6P2Q9 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.59e-6■■□□□ 12.6
PRPF8Q6P2Q9 MZT2B-205ENST00000457492 435 ntAPPRIS ALT2 TSL 511.88□□□□□ -0.513e-8■■□□□ 12.6
PRPF8Q6P2Q9 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.511e-10■■□□□ 12.6
PRPF8Q6P2Q9 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC11.83□□□□□ -0.529e-6■■□□□ 12.6
PRPF8Q6P2Q9 PIGL-207ENST00000477745 697 ntTSL 511.83□□□□□ -0.521e-10■■□□□ 12.6
PRPF8Q6P2Q9 NREP-220ENST00000513100 557 ntTSL 411.83□□□□□ -0.523e-18■■□□□ 12.6
PRPF8Q6P2Q9 IPO5-228ENST00000497270 536 ntTSL 411.81□□□□□ -0.528e-12■■□□□ 12.6
PRPF8Q6P2Q9 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC11.79□□□□□ -0.529e-6■■□□□ 12.6
PRPF8Q6P2Q9 XRCC1-207ENST00000598165 913 ntTSL 311.79□□□□□ -0.529e-6■■□□□ 12.6
PRPF8Q6P2Q9 PEMT-205ENST00000421096 662 ntTSL 311.78□□□□□ -0.529e-6■■□□□ 12.6
PRPF8Q6P2Q9 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.529e-6■■□□□ 12.6
PRPF8Q6P2Q9 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC11.7□□□□□ -0.549e-6■■□□□ 12.6
PRPF8Q6P2Q9 MPDU1-208ENST00000571877 1195 ntTSL 1 (best)11.59□□□□□ -0.551e-10■■□□□ 12.6
PRPF8Q6P2Q9 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC11.59□□□□□ -0.559e-6■■□□□ 12.6
PRPF8Q6P2Q9 C18orf21-203ENST00000587719 581 ntTSL 411.54□□□□□ -0.569e-6■■□□□ 12.6
PRPF8Q6P2Q9 PTOV1-AS2-203ENST00000601893 719 ntTSL 4 BASIC11.54□□□□□ -0.564e-6■■□□□ 12.6
PRPF8Q6P2Q9 PEMT-204ENST00000395783 1008 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.579e-6■■□□□ 12.6
PRPF8Q6P2Q9 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC11.47□□□□□ -0.579e-6■■□□□ 12.6
PRPF8Q6P2Q9 RARS-206ENST00000521329 581 ntTSL 411.46□□□□□ -0.579e-6■■□□□ 12.6
PRPF8Q6P2Q9 GARS-210ENST00000627489 324 ntTSL 4 BASIC11.43□□□□□ -0.589e-6■■□□□ 12.6
PRPF8Q6P2Q9 APOL1-209ENST00000433768 541 ntTSL 411.41□□□□□ -0.589e-7■■□□□ 12.6
PRPF8Q6P2Q9 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.599e-6■■□□□ 12.6
PRPF8Q6P2Q9 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.69e-6■■□□□ 12.6
PRPF8Q6P2Q9 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.63e-7■■□□□ 12.6
PRPF8Q6P2Q9 SNAPC2-206ENST00000597584 1413 ntTSL 1 (best) BASIC11.32□□□□□ -0.69e-6■■□□□ 12.6
PRPF8Q6P2Q9 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC11.28□□□□□ -0.69e-6■■□□□ 12.6
PRPF8Q6P2Q9 TBC1D5-216ENST00000444471 680 ntTSL 311.25□□□□□ -0.619e-6■■□□□ 12.6
PRPF8Q6P2Q9 PTOV1-221ENST00000602040 597 ntTSL 211.25□□□□□ -0.619e-6■■□□□ 12.6
PRPF8Q6P2Q9 NEDD4L-215ENST00000586268 830 ntTSL 311.24□□□□□ -0.613e-8■■□□□ 12.6
PRPF8Q6P2Q9 NEDD4L-235ENST00000592601 551 ntTSL 511.24□□□□□ -0.613e-8■■□□□ 12.6
PRPF8Q6P2Q9 MAPK7-206ENST00000482850 640 ntTSL 211.21□□□□□ -0.619e-6■■□□□ 12.6
PRPF8Q6P2Q9 TBC1D5-218ENST00000445294 623 ntTSL 211.2□□□□□ -0.629e-6■■□□□ 12.6
PRPF8Q6P2Q9 YIPF6-202ENST00000374643 734 ntTSL 311.16□□□□□ -0.629e-6■■□□□ 12.6
PRPF8Q6P2Q9 RDH11-211ENST00000557726 621 ntTSL 311.15□□□□□ -0.629e-7■■□□□ 12.6
PRPF8Q6P2Q9 C19orf12-208ENST00000614091 4489 ntAPPRIS P1 TSL 4 BASIC11.09□□□□□ -0.639e-6■■□□□ 12.6
PRPF8Q6P2Q9 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC11.09□□□□□ -0.636e-6■■□□□ 12.6
PRPF8Q6P2Q9 C18orf21-206ENST00000593210 185 ntTSL 311.02□□□□□ -0.659e-6■■□□□ 12.6
PRPF8Q6P2Q9 ERI3-204ENST00000456170 1103 ntTSL 511□□□□□ -0.659e-6■■□□□ 12.6
PRPF8Q6P2Q9 LYSMD4-211ENST00000604213 2356 ntTSL 1 (best)11□□□□□ -0.659e-6■■□□□ 12.6
PRPF8Q6P2Q9 LINC00969-241ENST00000600527 852 ntTSL 5 BASIC11□□□□□ -0.659e-6■■□□□ 12.6
PRPF8Q6P2Q9 RARS-209ENST00000524082 757 ntTSL 210.95□□□□□ -0.669e-6■■□□□ 12.6
PRPF8Q6P2Q9 YIPF6-205ENST00000462972 383 ntTSL 510.95□□□□□ -0.669e-6■■□□□ 12.6
PRPF8Q6P2Q9 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC10.94□□□□□ -0.669e-6■■□□□ 12.6
PRPF8Q6P2Q9 PIGL-202ENST00000395844 1257 ntTSL 5 BASIC10.93□□□□□ -0.661e-10■■□□□ 12.6
PRPF8Q6P2Q9 PIGL-210ENST00000498772 946 ntTSL 210.93□□□□□ -0.661e-10■■□□□ 12.6
PRPF8Q6P2Q9 PIGL-213ENST00000584797 582 ntTSL 310.93□□□□□ -0.661e-10■■□□□ 12.6
PRPF8Q6P2Q9 TBC1D5-207ENST00000425944 591 ntTSL 410.92□□□□□ -0.669e-6■■□□□ 12.6
PRPF8Q6P2Q9 TRAF2-202ENST00000414589 680 ntTSL 310.89□□□□□ -0.679e-6■■□□□ 12.6
PRPF8Q6P2Q9 ZC3H18-207ENST00000566317 628 ntTSL 210.89□□□□□ -0.678e-12■■□□□ 12.6
PRPF8Q6P2Q9 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.679e-6■■□□□ 12.6
PRPF8Q6P2Q9 APOL1-204ENST00000422471 561 ntTSL 410.84□□□□□ -0.679e-7■■□□□ 12.6
Retrieved 100 of 73,762 protein–RNA pairs in 577.4 ms