Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
LINC01558Q9Y6Z2 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
LINC01558Q9Y6Z2 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
LINC01558Q9Y6Z2 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
LINC01558Q9Y6Z2 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
LINC01558Q9Y6Z2 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC10.54□□□□□ -0.72
LINC01558Q9Y6Z2 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC10.53□□□□□ -0.72
LINC01558Q9Y6Z2 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC10.53□□□□□ -0.72
LINC01558Q9Y6Z2 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
LINC01558Q9Y6Z2 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
LINC01558Q9Y6Z2 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
LINC01558Q9Y6Z2 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC10.53□□□□□ -0.72
LINC01558Q9Y6Z2 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC10.53□□□□□ -0.72
LINC01558Q9Y6Z2 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
LINC01558Q9Y6Z2 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
LINC01558Q9Y6Z2 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
LINC01558Q9Y6Z2 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
LINC01558Q9Y6Z2 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC10.53□□□□□ -0.72
LINC01558Q9Y6Z2 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC10.53□□□□□ -0.72
LINC01558Q9Y6Z2 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
LINC01558Q9Y6Z2 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
LINC01558Q9Y6Z2 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
LINC01558Q9Y6Z2 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
LINC01558Q9Y6Z2 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
LINC01558Q9Y6Z2 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
LINC01558Q9Y6Z2 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
LINC01558Q9Y6Z2 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
LINC01558Q9Y6Z2 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
LINC01558Q9Y6Z2 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
LINC01558Q9Y6Z2 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC10.53□□□□□ -0.72
LINC01558Q9Y6Z2 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
LINC01558Q9Y6Z2 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
LINC01558Q9Y6Z2 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC10.53□□□□□ -0.72
LINC01558Q9Y6Z2 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC10.53□□□□□ -0.72
LINC01558Q9Y6Z2 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
LINC01558Q9Y6Z2 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
LINC01558Q9Y6Z2 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC10.53□□□□□ -0.72
LINC01558Q9Y6Z2 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
LINC01558Q9Y6Z2 LINC01465-201ENST00000408887 1940 ntBASIC10.52□□□□□ -0.72
LINC01558Q9Y6Z2 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.72
LINC01558Q9Y6Z2 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC10.52□□□□□ -0.72
LINC01558Q9Y6Z2 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.72
LINC01558Q9Y6Z2 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC10.52□□□□□ -0.72
LINC01558Q9Y6Z2 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC10.52□□□□□ -0.72
LINC01558Q9Y6Z2 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC10.52□□□□□ -0.73
LINC01558Q9Y6Z2 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
LINC01558Q9Y6Z2 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
LINC01558Q9Y6Z2 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
LINC01558Q9Y6Z2 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
LINC01558Q9Y6Z2 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC10.52□□□□□ -0.73
LINC01558Q9Y6Z2 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC10.52□□□□□ -0.73
LINC01558Q9Y6Z2 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
LINC01558Q9Y6Z2 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC10.52□□□□□ -0.73
LINC01558Q9Y6Z2 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
LINC01558Q9Y6Z2 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
LINC01558Q9Y6Z2 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC10.52□□□□□ -0.73
LINC01558Q9Y6Z2 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
LINC01558Q9Y6Z2 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
LINC01558Q9Y6Z2 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
LINC01558Q9Y6Z2 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC10.52□□□□□ -0.73
LINC01558Q9Y6Z2 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
LINC01558Q9Y6Z2 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC10.52□□□□□ -0.73
LINC01558Q9Y6Z2 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
LINC01558Q9Y6Z2 FER1L4-210ENST00000615531 5998 ntBASIC10.52□□□□□ -0.73
LINC01558Q9Y6Z2 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
LINC01558Q9Y6Z2 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
LINC01558Q9Y6Z2 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
LINC01558Q9Y6Z2 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC10.52□□□□□ -0.73
LINC01558Q9Y6Z2 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC10.52□□□□□ -0.73
LINC01558Q9Y6Z2 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
LINC01558Q9Y6Z2 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
LINC01558Q9Y6Z2 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LINC01558Q9Y6Z2 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
LINC01558Q9Y6Z2 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
LINC01558Q9Y6Z2 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
LINC01558Q9Y6Z2 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC10.51□□□□□ -0.73
LINC01558Q9Y6Z2 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC10.51□□□□□ -0.73
LINC01558Q9Y6Z2 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
LINC01558Q9Y6Z2 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LINC01558Q9Y6Z2 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
LINC01558Q9Y6Z2 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LINC01558Q9Y6Z2 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC10.51□□□□□ -0.73
LINC01558Q9Y6Z2 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
LINC01558Q9Y6Z2 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
LINC01558Q9Y6Z2 AC084018.2-201ENST00000613093 2607 ntBASIC10.51□□□□□ -0.73
LINC01558Q9Y6Z2 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
LINC01558Q9Y6Z2 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
LINC01558Q9Y6Z2 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
LINC01558Q9Y6Z2 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC10.51□□□□□ -0.73
LINC01558Q9Y6Z2 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
LINC01558Q9Y6Z2 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
LINC01558Q9Y6Z2 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LINC01558Q9Y6Z2 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
LINC01558Q9Y6Z2 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LINC01558Q9Y6Z2 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LINC01558Q9Y6Z2 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
LINC01558Q9Y6Z2 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC10.51□□□□□ -0.73
LINC01558Q9Y6Z2 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LINC01558Q9Y6Z2 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LINC01558Q9Y6Z2 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC10.51□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms