Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC19.08■□□□□ 0.64
AP4S1Q9Y587 AL138724.1-201ENST00000606771 1088 ntBASIC19.08■□□□□ 0.64
AP4S1Q9Y587 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
AP4S1Q9Y587 AP004607.4-201ENST00000530158 1459 ntBASIC19.08■□□□□ 0.64
AP4S1Q9Y587 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
AP4S1Q9Y587 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.08■□□□□ 0.64
AP4S1Q9Y587 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.08■□□□□ 0.64
AP4S1Q9Y587 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
AP4S1Q9Y587 LETM1P2-201ENST00000597330 2178 ntBASIC19.08■□□□□ 0.64
AP4S1Q9Y587 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.08■□□□□ 0.64
AP4S1Q9Y587 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.07■□□□□ 0.64
AP4S1Q9Y587 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
AP4S1Q9Y587 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
AP4S1Q9Y587 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
AP4S1Q9Y587 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC19.07■□□□□ 0.64
AP4S1Q9Y587 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC19.07■□□□□ 0.64
AP4S1Q9Y587 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
AP4S1Q9Y587 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC19.07■□□□□ 0.64
AP4S1Q9Y587 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC19.07■□□□□ 0.64
AP4S1Q9Y587 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
AP4S1Q9Y587 NEFHP1-201ENST00000412845 2629 ntBASIC19.07■□□□□ 0.64
AP4S1Q9Y587 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
AP4S1Q9Y587 AC120498.9-201ENST00000339021 3867 ntBASIC19.07■□□□□ 0.64
AP4S1Q9Y587 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
AP4S1Q9Y587 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC19.07■□□□□ 0.64
AP4S1Q9Y587 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
AP4S1Q9Y587 AL691432.2-201ENST00000607222 2038 ntBASIC19.07■□□□□ 0.64
AP4S1Q9Y587 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
AP4S1Q9Y587 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
AP4S1Q9Y587 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
AP4S1Q9Y587 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
AP4S1Q9Y587 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
AP4S1Q9Y587 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
AP4S1Q9Y587 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
AP4S1Q9Y587 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
AP4S1Q9Y587 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
AP4S1Q9Y587 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
AP4S1Q9Y587 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
AP4S1Q9Y587 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
AP4S1Q9Y587 AL356740.2-201ENST00000601559 647 ntBASIC19.06■□□□□ 0.64
AP4S1Q9Y587 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
AP4S1Q9Y587 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
AP4S1Q9Y587 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
AP4S1Q9Y587 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
AP4S1Q9Y587 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
AP4S1Q9Y587 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.06■□□□□ 0.64
AP4S1Q9Y587 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
AP4S1Q9Y587 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
AP4S1Q9Y587 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
AP4S1Q9Y587 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
AP4S1Q9Y587 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
AP4S1Q9Y587 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
AP4S1Q9Y587 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.05■□□□□ 0.64
AP4S1Q9Y587 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
AP4S1Q9Y587 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
AP4S1Q9Y587 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
AP4S1Q9Y587 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.05■□□□□ 0.64
AP4S1Q9Y587 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
AP4S1Q9Y587 Z82202.1-201ENST00000623446 1880 ntBASIC19.05■□□□□ 0.64
AP4S1Q9Y587 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
AP4S1Q9Y587 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
AP4S1Q9Y587 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
AP4S1Q9Y587 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
AP4S1Q9Y587 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
AP4S1Q9Y587 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.05■□□□□ 0.64
AP4S1Q9Y587 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
AP4S1Q9Y587 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
AP4S1Q9Y587 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
AP4S1Q9Y587 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
AP4S1Q9Y587 AC136469.2-201ENST00000623944 1028 ntBASIC19.05■□□□□ 0.64
AP4S1Q9Y587 TREX1-205ENST00000625293 1783 ntBASIC19.05■□□□□ 0.64
AP4S1Q9Y587 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
AP4S1Q9Y587 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC19.05■□□□□ 0.64
AP4S1Q9Y587 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
AP4S1Q9Y587 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
AP4S1Q9Y587 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.05■□□□□ 0.64
AP4S1Q9Y587 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC19.05■□□□□ 0.64
AP4S1Q9Y587 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
AP4S1Q9Y587 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
AP4S1Q9Y587 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
AP4S1Q9Y587 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
AP4S1Q9Y587 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
AP4S1Q9Y587 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
AP4S1Q9Y587 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
AP4S1Q9Y587 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
AP4S1Q9Y587 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
AP4S1Q9Y587 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
AP4S1Q9Y587 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
AP4S1Q9Y587 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
AP4S1Q9Y587 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
AP4S1Q9Y587 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
AP4S1Q9Y587 SERBP1P1-201ENST00000396021 1160 ntBASIC19.04■□□□□ 0.64
AP4S1Q9Y587 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
AP4S1Q9Y587 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.04■□□□□ 0.64
AP4S1Q9Y587 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC19.04■□□□□ 0.64
AP4S1Q9Y587 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.04■□□□□ 0.64
AP4S1Q9Y587 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
AP4S1Q9Y587 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.04■□□□□ 0.64
AP4S1Q9Y587 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
AP4S1Q9Y587 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms