Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 AC012618.2-201ENST00000428058 849 ntBASIC21.21■□□□□ 0.99
YIPF1Q9Y548 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
YIPF1Q9Y548 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
YIPF1Q9Y548 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
YIPF1Q9Y548 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.21■□□□□ 0.99
YIPF1Q9Y548 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC21.21■□□□□ 0.99
YIPF1Q9Y548 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
YIPF1Q9Y548 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
YIPF1Q9Y548 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
YIPF1Q9Y548 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
YIPF1Q9Y548 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
YIPF1Q9Y548 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
YIPF1Q9Y548 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
YIPF1Q9Y548 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
YIPF1Q9Y548 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC21.2■□□□□ 0.98
YIPF1Q9Y548 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
YIPF1Q9Y548 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
YIPF1Q9Y548 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
YIPF1Q9Y548 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
YIPF1Q9Y548 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
YIPF1Q9Y548 AC233702.5-201ENST00000584107 538 ntBASIC21.2■□□□□ 0.98
YIPF1Q9Y548 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
YIPF1Q9Y548 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.2■□□□□ 0.98
YIPF1Q9Y548 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
YIPF1Q9Y548 AC124283.5-201ENST00000624661 1809 ntBASIC21.2■□□□□ 0.98
YIPF1Q9Y548 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC21.2■□□□□ 0.98
YIPF1Q9Y548 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
YIPF1Q9Y548 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
YIPF1Q9Y548 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
YIPF1Q9Y548 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
YIPF1Q9Y548 AF106564.1-201ENST00000607058 2553 ntBASIC21.19■□□□□ 0.98
YIPF1Q9Y548 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
YIPF1Q9Y548 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
YIPF1Q9Y548 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
YIPF1Q9Y548 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
YIPF1Q9Y548 PRKY-204ENST00000533551 1019 ntBASIC21.19■□□□□ 0.98
YIPF1Q9Y548 REXO2-216ENST00000544196 452 ntTSL 3 BASIC21.19■□□□□ 0.98
YIPF1Q9Y548 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
YIPF1Q9Y548 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC21.19■□□□□ 0.98
YIPF1Q9Y548 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC21.19■□□□□ 0.98
YIPF1Q9Y548 PLK5-205ENST00000642079 1969 ntBASIC21.19■□□□□ 0.98
YIPF1Q9Y548 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
YIPF1Q9Y548 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
YIPF1Q9Y548 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC21.19■□□□□ 0.98
YIPF1Q9Y548 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
YIPF1Q9Y548 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
YIPF1Q9Y548 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
YIPF1Q9Y548 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
YIPF1Q9Y548 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
YIPF1Q9Y548 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
YIPF1Q9Y548 RPS2P55-201ENST00000397318 883 ntBASIC21.18■□□□□ 0.98
YIPF1Q9Y548 AC107956.1-201ENST00000494359 873 ntBASIC21.18■□□□□ 0.98
YIPF1Q9Y548 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC21.18■□□□□ 0.98
YIPF1Q9Y548 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC21.18■□□□□ 0.98
YIPF1Q9Y548 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC21.18■□□□□ 0.98
YIPF1Q9Y548 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
YIPF1Q9Y548 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
YIPF1Q9Y548 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
YIPF1Q9Y548 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC21.18■□□□□ 0.98
YIPF1Q9Y548 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
YIPF1Q9Y548 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
YIPF1Q9Y548 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
YIPF1Q9Y548 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
YIPF1Q9Y548 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC21.17■□□□□ 0.98
YIPF1Q9Y548 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
YIPF1Q9Y548 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC21.17■□□□□ 0.98
YIPF1Q9Y548 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
YIPF1Q9Y548 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC21.17■□□□□ 0.98
YIPF1Q9Y548 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC21.17■□□□□ 0.98
YIPF1Q9Y548 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC21.17■□□□□ 0.98
YIPF1Q9Y548 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC21.17■□□□□ 0.98
YIPF1Q9Y548 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC21.17■□□□□ 0.98
YIPF1Q9Y548 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC21.17■□□□□ 0.98
YIPF1Q9Y548 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
YIPF1Q9Y548 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC21.17■□□□□ 0.98
YIPF1Q9Y548 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC21.17■□□□□ 0.98
YIPF1Q9Y548 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
YIPF1Q9Y548 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
YIPF1Q9Y548 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC21.17■□□□□ 0.98
YIPF1Q9Y548 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC21.17■□□□□ 0.98
YIPF1Q9Y548 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC21.17■□□□□ 0.98
YIPF1Q9Y548 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
YIPF1Q9Y548 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC21.17■□□□□ 0.98
YIPF1Q9Y548 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
YIPF1Q9Y548 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
YIPF1Q9Y548 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC21.16■□□□□ 0.98
YIPF1Q9Y548 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
YIPF1Q9Y548 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
YIPF1Q9Y548 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC21.16■□□□□ 0.98
YIPF1Q9Y548 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
YIPF1Q9Y548 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
YIPF1Q9Y548 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
YIPF1Q9Y548 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
YIPF1Q9Y548 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC21.16■□□□□ 0.98
YIPF1Q9Y548 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
YIPF1Q9Y548 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC21.16■□□□□ 0.98
YIPF1Q9Y548 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC21.16■□□□□ 0.98
YIPF1Q9Y548 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC21.16■□□□□ 0.98
YIPF1Q9Y548 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
YIPF1Q9Y548 AL121829.2-201ENST00000620908 328 ntBASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms