Protein–RNA interactions for Protein: Q9Y4K3

TRAF6, TNF receptor-associated factor 6, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF6Q9Y4K3 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRAF6Q9Y4K3 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.65■□□□□ 0.74
TRAF6Q9Y4K3 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TRAF6Q9Y4K3 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC19.65■□□□□ 0.74
TRAF6Q9Y4K3 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TRAF6Q9Y4K3 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRAF6Q9Y4K3 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRAF6Q9Y4K3 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRAF6Q9Y4K3 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.65■□□□□ 0.74
TRAF6Q9Y4K3 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRAF6Q9Y4K3 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRAF6Q9Y4K3 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRAF6Q9Y4K3 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC19.65■□□□□ 0.74
TRAF6Q9Y4K3 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.65■□□□□ 0.74
TRAF6Q9Y4K3 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC19.65■□□□□ 0.74
TRAF6Q9Y4K3 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
TRAF6Q9Y4K3 AL158211.5-201ENST00000623583 2518 ntBASIC19.65■□□□□ 0.74
TRAF6Q9Y4K3 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC19.65■□□□□ 0.74
TRAF6Q9Y4K3 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.65■□□□□ 0.74
TRAF6Q9Y4K3 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.64■□□□□ 0.74
TRAF6Q9Y4K3 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
TRAF6Q9Y4K3 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRAF6Q9Y4K3 MIR638-201ENST00000385237 100 ntBASIC19.64■□□□□ 0.73
TRAF6Q9Y4K3 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.64■□□□□ 0.73
TRAF6Q9Y4K3 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC19.64■□□□□ 0.73
TRAF6Q9Y4K3 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC19.64■□□□□ 0.73
TRAF6Q9Y4K3 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
TRAF6Q9Y4K3 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRAF6Q9Y4K3 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRAF6Q9Y4K3 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRAF6Q9Y4K3 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC19.64■□□□□ 0.73
TRAF6Q9Y4K3 AL691432.2-201ENST00000607222 2038 ntBASIC19.64■□□□□ 0.73
TRAF6Q9Y4K3 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRAF6Q9Y4K3 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRAF6Q9Y4K3 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TRAF6Q9Y4K3 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRAF6Q9Y4K3 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRAF6Q9Y4K3 AC116562.4-201ENST00000641316 2276 ntBASIC19.63■□□□□ 0.73
TRAF6Q9Y4K3 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRAF6Q9Y4K3 H19-201ENST00000411754 1788 ntTSL 5 BASIC19.63■□□□□ 0.73
TRAF6Q9Y4K3 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TRAF6Q9Y4K3 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TRAF6Q9Y4K3 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRAF6Q9Y4K3 AC019069.1-201ENST00000610008 1333 ntBASIC19.63■□□□□ 0.73
TRAF6Q9Y4K3 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRAF6Q9Y4K3 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TRAF6Q9Y4K3 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.63■□□□□ 0.73
TRAF6Q9Y4K3 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.63■□□□□ 0.73
TRAF6Q9Y4K3 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC19.63■□□□□ 0.73
TRAF6Q9Y4K3 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC19.63■□□□□ 0.73
TRAF6Q9Y4K3 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.63■□□□□ 0.73
TRAF6Q9Y4K3 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC19.63■□□□□ 0.73
TRAF6Q9Y4K3 FAM21FP-204ENST00000608637 956 ntBASIC19.63■□□□□ 0.73
TRAF6Q9Y4K3 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
TRAF6Q9Y4K3 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
TRAF6Q9Y4K3 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRAF6Q9Y4K3 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.63■□□□□ 0.73
TRAF6Q9Y4K3 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TRAF6Q9Y4K3 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC19.62■□□□□ 0.73
TRAF6Q9Y4K3 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.62■□□□□ 0.73
TRAF6Q9Y4K3 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.62■□□□□ 0.73
TRAF6Q9Y4K3 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TRAF6Q9Y4K3 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
TRAF6Q9Y4K3 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.62■□□□□ 0.73
TRAF6Q9Y4K3 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
TRAF6Q9Y4K3 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC19.62■□□□□ 0.73
TRAF6Q9Y4K3 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC19.62■□□□□ 0.73
TRAF6Q9Y4K3 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC19.62■□□□□ 0.73
TRAF6Q9Y4K3 AC004854.2-201ENST00000608450 1441 ntBASIC19.62■□□□□ 0.73
TRAF6Q9Y4K3 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TRAF6Q9Y4K3 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRAF6Q9Y4K3 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRAF6Q9Y4K3 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRAF6Q9Y4K3 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC19.62■□□□□ 0.73
TRAF6Q9Y4K3 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
TRAF6Q9Y4K3 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRAF6Q9Y4K3 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TRAF6Q9Y4K3 YBX1P1-201ENST00000445822 960 ntBASIC19.62■□□□□ 0.73
TRAF6Q9Y4K3 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC19.62■□□□□ 0.73
TRAF6Q9Y4K3 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
TRAF6Q9Y4K3 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TRAF6Q9Y4K3 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TRAF6Q9Y4K3 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
TRAF6Q9Y4K3 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRAF6Q9Y4K3 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRAF6Q9Y4K3 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TRAF6Q9Y4K3 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
TRAF6Q9Y4K3 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.62■□□□□ 0.73
TRAF6Q9Y4K3 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRAF6Q9Y4K3 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRAF6Q9Y4K3 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.62■□□□□ 0.73
TRAF6Q9Y4K3 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRAF6Q9Y4K3 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
TRAF6Q9Y4K3 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRAF6Q9Y4K3 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRAF6Q9Y4K3 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRAF6Q9Y4K3 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
TRAF6Q9Y4K3 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRAF6Q9Y4K3 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRAF6Q9Y4K3 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms