Protein–RNA interactions for Protein: Q9UMQ6

CAPN11, Calpain-11, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN11Q9UMQ6 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
CAPN11Q9UMQ6 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
CAPN11Q9UMQ6 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CAPN11Q9UMQ6 CD37-204ENST00000535669 1674 ntTSL 2 BASIC21.85■■□□□ 1.09
CAPN11Q9UMQ6 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CAPN11Q9UMQ6 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
CAPN11Q9UMQ6 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CAPN11Q9UMQ6 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC21.84■■□□□ 1.09
CAPN11Q9UMQ6 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CAPN11Q9UMQ6 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CAPN11Q9UMQ6 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CAPN11Q9UMQ6 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
CAPN11Q9UMQ6 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
CAPN11Q9UMQ6 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
CAPN11Q9UMQ6 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CAPN11Q9UMQ6 KRT18P14-201ENST00000534205 1250 ntBASIC21.84■■□□□ 1.09
CAPN11Q9UMQ6 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC21.84■■□□□ 1.09
CAPN11Q9UMQ6 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC21.84■■□□□ 1.09
CAPN11Q9UMQ6 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
CAPN11Q9UMQ6 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CAPN11Q9UMQ6 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC21.84■■□□□ 1.09
CAPN11Q9UMQ6 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC21.84■■□□□ 1.09
CAPN11Q9UMQ6 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CAPN11Q9UMQ6 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC21.84■■□□□ 1.09
CAPN11Q9UMQ6 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CAPN11Q9UMQ6 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CAPN11Q9UMQ6 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC21.84■■□□□ 1.09
CAPN11Q9UMQ6 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
CAPN11Q9UMQ6 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
CAPN11Q9UMQ6 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CAPN11Q9UMQ6 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CAPN11Q9UMQ6 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC21.83■■□□□ 1.09
CAPN11Q9UMQ6 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC21.83■■□□□ 1.09
CAPN11Q9UMQ6 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC21.83■■□□□ 1.09
CAPN11Q9UMQ6 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CAPN11Q9UMQ6 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC21.83■■□□□ 1.09
CAPN11Q9UMQ6 RAB43-208ENST00000615093 783 ntTSL 5 BASIC21.83■■□□□ 1.09
CAPN11Q9UMQ6 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC21.83■■□□□ 1.09
CAPN11Q9UMQ6 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CAPN11Q9UMQ6 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CAPN11Q9UMQ6 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC21.83■■□□□ 1.09
CAPN11Q9UMQ6 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC21.83■■□□□ 1.08
CAPN11Q9UMQ6 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.08
CAPN11Q9UMQ6 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
CAPN11Q9UMQ6 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC21.83■■□□□ 1.08
CAPN11Q9UMQ6 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC21.83■■□□□ 1.08
CAPN11Q9UMQ6 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC21.83■■□□□ 1.08
CAPN11Q9UMQ6 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC21.83■■□□□ 1.08
CAPN11Q9UMQ6 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
CAPN11Q9UMQ6 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC21.83■■□□□ 1.08
CAPN11Q9UMQ6 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
CAPN11Q9UMQ6 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CAPN11Q9UMQ6 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CAPN11Q9UMQ6 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
CAPN11Q9UMQ6 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CAPN11Q9UMQ6 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
CAPN11Q9UMQ6 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CAPN11Q9UMQ6 CDV3P1-201ENST00000471403 739 ntBASIC21.82■■□□□ 1.08
CAPN11Q9UMQ6 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC21.82■■□□□ 1.08
CAPN11Q9UMQ6 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC21.82■■□□□ 1.08
CAPN11Q9UMQ6 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC21.82■■□□□ 1.08
CAPN11Q9UMQ6 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC21.82■■□□□ 1.08
CAPN11Q9UMQ6 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
CAPN11Q9UMQ6 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CAPN11Q9UMQ6 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CAPN11Q9UMQ6 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC21.82■■□□□ 1.08
CAPN11Q9UMQ6 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
CAPN11Q9UMQ6 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CAPN11Q9UMQ6 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CAPN11Q9UMQ6 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CAPN11Q9UMQ6 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CAPN11Q9UMQ6 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
CAPN11Q9UMQ6 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CAPN11Q9UMQ6 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
CAPN11Q9UMQ6 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CAPN11Q9UMQ6 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC21.81■■□□□ 1.08
CAPN11Q9UMQ6 SP2-202ENST00000613139 908 ntTSL 5 BASIC21.81■■□□□ 1.08
CAPN11Q9UMQ6 TFG-210ENST00000620299 1289 ntTSL 5 BASIC21.81■■□□□ 1.08
CAPN11Q9UMQ6 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC21.81■■□□□ 1.08
CAPN11Q9UMQ6 AC087289.5-201ENST00000586076 3175 ntBASIC21.81■■□□□ 1.08
CAPN11Q9UMQ6 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CAPN11Q9UMQ6 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CAPN11Q9UMQ6 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CAPN11Q9UMQ6 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
CAPN11Q9UMQ6 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
CAPN11Q9UMQ6 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
CAPN11Q9UMQ6 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CAPN11Q9UMQ6 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC21.8■■□□□ 1.08
CAPN11Q9UMQ6 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CAPN11Q9UMQ6 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CAPN11Q9UMQ6 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
CAPN11Q9UMQ6 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CAPN11Q9UMQ6 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC21.8■■□□□ 1.08
CAPN11Q9UMQ6 POLI-202ENST00000406285 2030 ntTSL 2 BASIC21.8■■□□□ 1.08
CAPN11Q9UMQ6 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC21.8■■□□□ 1.08
CAPN11Q9UMQ6 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
CAPN11Q9UMQ6 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC21.8■■□□□ 1.08
CAPN11Q9UMQ6 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
CAPN11Q9UMQ6 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
CAPN11Q9UMQ6 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC21.8■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms