Protein–RNA interactions for Protein: Q9UKG1

APPL1, DCC-interacting protein 13-alpha, humanhuman

Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPL1Q9UKG1 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
APPL1Q9UKG1 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
APPL1Q9UKG1 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC20.43■□□□□ 0.86
APPL1Q9UKG1 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
APPL1Q9UKG1 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
APPL1Q9UKG1 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
APPL1Q9UKG1 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
APPL1Q9UKG1 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
APPL1Q9UKG1 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
APPL1Q9UKG1 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
APPL1Q9UKG1 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
APPL1Q9UKG1 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
APPL1Q9UKG1 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
APPL1Q9UKG1 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
APPL1Q9UKG1 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
APPL1Q9UKG1 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
APPL1Q9UKG1 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC20.42■□□□□ 0.86
APPL1Q9UKG1 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC20.42■□□□□ 0.86
APPL1Q9UKG1 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20.42■□□□□ 0.86
APPL1Q9UKG1 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC20.42■□□□□ 0.86
APPL1Q9UKG1 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
APPL1Q9UKG1 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
APPL1Q9UKG1 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.42■□□□□ 0.86
APPL1Q9UKG1 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
APPL1Q9UKG1 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
APPL1Q9UKG1 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
APPL1Q9UKG1 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
APPL1Q9UKG1 MKRN4P-201ENST00000444706 1521 ntBASIC20.42■□□□□ 0.86
APPL1Q9UKG1 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
APPL1Q9UKG1 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
APPL1Q9UKG1 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.42■□□□□ 0.86
APPL1Q9UKG1 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.41■□□□□ 0.86
APPL1Q9UKG1 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
APPL1Q9UKG1 AC007225.1-201ENST00000566331 1836 ntBASIC20.41■□□□□ 0.86
APPL1Q9UKG1 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
APPL1Q9UKG1 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
APPL1Q9UKG1 MIPEPP3-201ENST00000412105 444 ntBASIC20.41■□□□□ 0.86
APPL1Q9UKG1 PGM5P4-201ENST00000421970 445 ntBASIC20.41■□□□□ 0.86
APPL1Q9UKG1 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
APPL1Q9UKG1 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC20.41■□□□□ 0.86
APPL1Q9UKG1 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
APPL1Q9UKG1 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
APPL1Q9UKG1 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
APPL1Q9UKG1 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
APPL1Q9UKG1 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.41■□□□□ 0.86
APPL1Q9UKG1 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
APPL1Q9UKG1 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
APPL1Q9UKG1 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
APPL1Q9UKG1 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
APPL1Q9UKG1 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
APPL1Q9UKG1 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
APPL1Q9UKG1 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
APPL1Q9UKG1 TSPY20P-201ENST00000450910 630 ntBASIC20.4■□□□□ 0.86
APPL1Q9UKG1 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
APPL1Q9UKG1 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC20.4■□□□□ 0.86
APPL1Q9UKG1 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.4■□□□□ 0.86
APPL1Q9UKG1 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC20.4■□□□□ 0.86
APPL1Q9UKG1 MIR2861-201ENST00000636310 90 ntBASIC20.4■□□□□ 0.86
APPL1Q9UKG1 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
APPL1Q9UKG1 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
APPL1Q9UKG1 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
APPL1Q9UKG1 FP700111.2-201ENST00000619190 1892 ntBASIC20.39■□□□□ 0.86
APPL1Q9UKG1 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
APPL1Q9UKG1 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
APPL1Q9UKG1 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC20.39■□□□□ 0.86
APPL1Q9UKG1 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
APPL1Q9UKG1 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
APPL1Q9UKG1 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.85
APPL1Q9UKG1 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC20.39■□□□□ 0.85
APPL1Q9UKG1 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC20.39■□□□□ 0.85
APPL1Q9UKG1 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC20.39■□□□□ 0.85
APPL1Q9UKG1 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20.39■□□□□ 0.85
APPL1Q9UKG1 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC20.39■□□□□ 0.85
APPL1Q9UKG1 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC20.39■□□□□ 0.85
APPL1Q9UKG1 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
APPL1Q9UKG1 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
APPL1Q9UKG1 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC20.39■□□□□ 0.85
APPL1Q9UKG1 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
APPL1Q9UKG1 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
APPL1Q9UKG1 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
APPL1Q9UKG1 CYP21A1P-202ENST00000354927 1481 ntBASIC20.38■□□□□ 0.85
APPL1Q9UKG1 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
APPL1Q9UKG1 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
APPL1Q9UKG1 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
APPL1Q9UKG1 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
APPL1Q9UKG1 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
APPL1Q9UKG1 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC20.38■□□□□ 0.85
APPL1Q9UKG1 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC20.38■□□□□ 0.85
APPL1Q9UKG1 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC20.38■□□□□ 0.85
APPL1Q9UKG1 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC20.38■□□□□ 0.85
APPL1Q9UKG1 AC098934.4-201ENST00000564127 592 ntBASIC20.38■□□□□ 0.85
APPL1Q9UKG1 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC20.38■□□□□ 0.85
APPL1Q9UKG1 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.38■□□□□ 0.85
APPL1Q9UKG1 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
APPL1Q9UKG1 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
APPL1Q9UKG1 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
APPL1Q9UKG1 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC20.38■□□□□ 0.85
APPL1Q9UKG1 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
APPL1Q9UKG1 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
APPL1Q9UKG1 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms