Protein–RNA interactions for Protein: Q9UBP0

SPAST, Spastin, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPASTQ9UBP0 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC20.09■□□□□ 0.81
SPASTQ9UBP0 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.09■□□□□ 0.81
SPASTQ9UBP0 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SPASTQ9UBP0 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
SPASTQ9UBP0 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
SPASTQ9UBP0 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.09■□□□□ 0.81
SPASTQ9UBP0 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SPASTQ9UBP0 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SPASTQ9UBP0 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
SPASTQ9UBP0 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
SPASTQ9UBP0 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
SPASTQ9UBP0 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
SPASTQ9UBP0 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SPASTQ9UBP0 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SPASTQ9UBP0 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SPASTQ9UBP0 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SPASTQ9UBP0 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC20.08■□□□□ 0.81
SPASTQ9UBP0 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SPASTQ9UBP0 C2orf69P4-201ENST00000565394 541 ntBASIC20.08■□□□□ 0.81
SPASTQ9UBP0 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC20.08■□□□□ 0.81
SPASTQ9UBP0 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.08■□□□□ 0.8
SPASTQ9UBP0 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SPASTQ9UBP0 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SPASTQ9UBP0 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SPASTQ9UBP0 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC20.07■□□□□ 0.8
SPASTQ9UBP0 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SPASTQ9UBP0 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SPASTQ9UBP0 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
SPASTQ9UBP0 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SPASTQ9UBP0 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SPASTQ9UBP0 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SPASTQ9UBP0 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SPASTQ9UBP0 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SPASTQ9UBP0 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SPASTQ9UBP0 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC20.07■□□□□ 0.8
SPASTQ9UBP0 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC20.07■□□□□ 0.8
SPASTQ9UBP0 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC20.07■□□□□ 0.8
SPASTQ9UBP0 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SPASTQ9UBP0 SOX15-203ENST00000570788 1093 ntBASIC20.07■□□□□ 0.8
SPASTQ9UBP0 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC20.07■□□□□ 0.8
SPASTQ9UBP0 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC20.07■□□□□ 0.8
SPASTQ9UBP0 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC20.07■□□□□ 0.8
SPASTQ9UBP0 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC20.07■□□□□ 0.8
SPASTQ9UBP0 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC20.07■□□□□ 0.8
SPASTQ9UBP0 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
SPASTQ9UBP0 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SPASTQ9UBP0 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SPASTQ9UBP0 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SPASTQ9UBP0 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SPASTQ9UBP0 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC20.06■□□□□ 0.8
SPASTQ9UBP0 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
SPASTQ9UBP0 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SPASTQ9UBP0 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SPASTQ9UBP0 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
SPASTQ9UBP0 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC20.06■□□□□ 0.8
SPASTQ9UBP0 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC20.06■□□□□ 0.8
SPASTQ9UBP0 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.06■□□□□ 0.8
SPASTQ9UBP0 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC20.06■□□□□ 0.8
SPASTQ9UBP0 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC20.06■□□□□ 0.8
SPASTQ9UBP0 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
SPASTQ9UBP0 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.06■□□□□ 0.8
SPASTQ9UBP0 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.06■□□□□ 0.8
SPASTQ9UBP0 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
SPASTQ9UBP0 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.06■□□□□ 0.8
SPASTQ9UBP0 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SPASTQ9UBP0 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC20.05■□□□□ 0.8
SPASTQ9UBP0 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC20.05■□□□□ 0.8
SPASTQ9UBP0 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.05■□□□□ 0.8
SPASTQ9UBP0 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SPASTQ9UBP0 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC20.05■□□□□ 0.8
SPASTQ9UBP0 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
SPASTQ9UBP0 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC20.05■□□□□ 0.8
SPASTQ9UBP0 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SPASTQ9UBP0 SLC29A4P2-201ENST00000504749 1089 ntBASIC20.05■□□□□ 0.8
SPASTQ9UBP0 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
SPASTQ9UBP0 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC20.05■□□□□ 0.8
SPASTQ9UBP0 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SPASTQ9UBP0 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.05■□□□□ 0.8
SPASTQ9UBP0 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SPASTQ9UBP0 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.05■□□□□ 0.8
SPASTQ9UBP0 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.05■□□□□ 0.8
SPASTQ9UBP0 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
SPASTQ9UBP0 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
SPASTQ9UBP0 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.04■□□□□ 0.8
SPASTQ9UBP0 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SPASTQ9UBP0 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
SPASTQ9UBP0 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
SPASTQ9UBP0 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
SPASTQ9UBP0 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.04■□□□□ 0.8
SPASTQ9UBP0 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SPASTQ9UBP0 UBE2SP1-201ENST00000450587 669 ntBASIC20.04■□□□□ 0.8
SPASTQ9UBP0 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC20.04■□□□□ 0.8
SPASTQ9UBP0 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
SPASTQ9UBP0 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC20.04■□□□□ 0.8
SPASTQ9UBP0 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC20.04■□□□□ 0.8
SPASTQ9UBP0 BRWD1-AS2-201ENST00000603064 1028 ntBASIC20.04■□□□□ 0.8
SPASTQ9UBP0 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SPASTQ9UBP0 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SPASTQ9UBP0 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
SPASTQ9UBP0 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms