Protein–RNA interactions for Protein: Q9UBI1

COMMD3, COMM domain-containing protein 3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3Q9UBI1 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
COMMD3Q9UBI1 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
COMMD3Q9UBI1 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.76■□□□□ 0.43
COMMD3Q9UBI1 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
COMMD3Q9UBI1 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
COMMD3Q9UBI1 LETM1P2-201ENST00000597330 2178 ntBASIC17.76■□□□□ 0.43
COMMD3Q9UBI1 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC17.76■□□□□ 0.43
COMMD3Q9UBI1 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
COMMD3Q9UBI1 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
COMMD3Q9UBI1 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
COMMD3Q9UBI1 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC17.76■□□□□ 0.43
COMMD3Q9UBI1 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC17.76■□□□□ 0.43
COMMD3Q9UBI1 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
COMMD3Q9UBI1 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.76■□□□□ 0.43
COMMD3Q9UBI1 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
COMMD3Q9UBI1 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
COMMD3Q9UBI1 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
COMMD3Q9UBI1 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
COMMD3Q9UBI1 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC17.76■□□□□ 0.43
COMMD3Q9UBI1 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
COMMD3Q9UBI1 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
COMMD3Q9UBI1 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.75■□□□□ 0.43
COMMD3Q9UBI1 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC17.75■□□□□ 0.43
COMMD3Q9UBI1 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
COMMD3Q9UBI1 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
COMMD3Q9UBI1 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC17.75■□□□□ 0.43
COMMD3Q9UBI1 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
COMMD3Q9UBI1 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC17.75■□□□□ 0.43
COMMD3Q9UBI1 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
COMMD3Q9UBI1 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC17.75■□□□□ 0.43
COMMD3Q9UBI1 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC17.75■□□□□ 0.43
COMMD3Q9UBI1 AL033527.3-201ENST00000566366 1196 ntBASIC17.75■□□□□ 0.43
COMMD3Q9UBI1 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
COMMD3Q9UBI1 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
COMMD3Q9UBI1 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
COMMD3Q9UBI1 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
COMMD3Q9UBI1 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
COMMD3Q9UBI1 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC17.75■□□□□ 0.43
COMMD3Q9UBI1 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
COMMD3Q9UBI1 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
COMMD3Q9UBI1 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
COMMD3Q9UBI1 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
COMMD3Q9UBI1 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
COMMD3Q9UBI1 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
COMMD3Q9UBI1 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
COMMD3Q9UBI1 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
COMMD3Q9UBI1 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
COMMD3Q9UBI1 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
COMMD3Q9UBI1 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
COMMD3Q9UBI1 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
COMMD3Q9UBI1 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC17.74■□□□□ 0.43
COMMD3Q9UBI1 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
COMMD3Q9UBI1 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
COMMD3Q9UBI1 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
COMMD3Q9UBI1 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
COMMD3Q9UBI1 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
COMMD3Q9UBI1 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC17.74■□□□□ 0.43
COMMD3Q9UBI1 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
COMMD3Q9UBI1 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
COMMD3Q9UBI1 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
COMMD3Q9UBI1 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
COMMD3Q9UBI1 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
COMMD3Q9UBI1 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
COMMD3Q9UBI1 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC17.74■□□□□ 0.43
COMMD3Q9UBI1 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
COMMD3Q9UBI1 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
COMMD3Q9UBI1 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
COMMD3Q9UBI1 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
COMMD3Q9UBI1 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC17.73■□□□□ 0.43
COMMD3Q9UBI1 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
COMMD3Q9UBI1 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
COMMD3Q9UBI1 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
COMMD3Q9UBI1 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
COMMD3Q9UBI1 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC17.73■□□□□ 0.43
COMMD3Q9UBI1 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC17.73■□□□□ 0.43
COMMD3Q9UBI1 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
COMMD3Q9UBI1 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
COMMD3Q9UBI1 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
COMMD3Q9UBI1 PXK-203ENST00000383715 1756 ntTSL 5 BASIC17.73■□□□□ 0.43
COMMD3Q9UBI1 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
COMMD3Q9UBI1 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
COMMD3Q9UBI1 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC17.73■□□□□ 0.43
COMMD3Q9UBI1 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC17.73■□□□□ 0.43
COMMD3Q9UBI1 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
COMMD3Q9UBI1 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
COMMD3Q9UBI1 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
COMMD3Q9UBI1 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC17.72■□□□□ 0.43
COMMD3Q9UBI1 H19-201ENST00000411754 1788 ntTSL 5 BASIC17.72■□□□□ 0.43
COMMD3Q9UBI1 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC17.72■□□□□ 0.43
COMMD3Q9UBI1 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
COMMD3Q9UBI1 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC17.72■□□□□ 0.43
COMMD3Q9UBI1 AP005435.1-201ENST00000529293 1178 ntBASIC17.72■□□□□ 0.43
COMMD3Q9UBI1 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC17.72■□□□□ 0.43
COMMD3Q9UBI1 MIR6724-1-201ENST00000616420 92 ntBASIC17.72■□□□□ 0.43
COMMD3Q9UBI1 MIR6724-2-201ENST00000616483 92 ntBASIC17.72■□□□□ 0.43
COMMD3Q9UBI1 MIR6724-4-201ENST00000617390 92 ntBASIC17.72■□□□□ 0.43
COMMD3Q9UBI1 MIR6724-3-201ENST00000622482 92 ntBASIC17.72■□□□□ 0.43
COMMD3Q9UBI1 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
COMMD3Q9UBI1 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC17.72■□□□□ 0.43
COMMD3Q9UBI1 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms