Protein–RNA interactions for Protein: Q9NRR5

UBQLN4, Ubiquilin-4, humanhuman

Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4Q9NRR5 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC18.6■□□□□ 0.57
UBQLN4Q9NRR5 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC18.6■□□□□ 0.57
UBQLN4Q9NRR5 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC18.6■□□□□ 0.57
UBQLN4Q9NRR5 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC18.6■□□□□ 0.57
UBQLN4Q9NRR5 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
UBQLN4Q9NRR5 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
UBQLN4Q9NRR5 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
UBQLN4Q9NRR5 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC18.6■□□□□ 0.57
UBQLN4Q9NRR5 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
UBQLN4Q9NRR5 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.6■□□□□ 0.57
UBQLN4Q9NRR5 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC18.59■□□□□ 0.57
UBQLN4Q9NRR5 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
UBQLN4Q9NRR5 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
UBQLN4Q9NRR5 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC18.59■□□□□ 0.57
UBQLN4Q9NRR5 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.59■□□□□ 0.57
UBQLN4Q9NRR5 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
UBQLN4Q9NRR5 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
UBQLN4Q9NRR5 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
UBQLN4Q9NRR5 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
UBQLN4Q9NRR5 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
UBQLN4Q9NRR5 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
UBQLN4Q9NRR5 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
UBQLN4Q9NRR5 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
UBQLN4Q9NRR5 PHB2-213ENST00000546111 858 ntTSL 2 BASIC18.59■□□□□ 0.57
UBQLN4Q9NRR5 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC18.59■□□□□ 0.57
UBQLN4Q9NRR5 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC18.59■□□□□ 0.57
UBQLN4Q9NRR5 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC18.59■□□□□ 0.57
UBQLN4Q9NRR5 MARS-234ENST00000630571 216 ntTSL 5 BASIC18.59■□□□□ 0.57
UBQLN4Q9NRR5 MARS-235ENST00000630803 183 ntTSL 3 BASIC18.59■□□□□ 0.57
UBQLN4Q9NRR5 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
UBQLN4Q9NRR5 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC18.59■□□□□ 0.57
UBQLN4Q9NRR5 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC18.59■□□□□ 0.57
UBQLN4Q9NRR5 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC18.59■□□□□ 0.57
UBQLN4Q9NRR5 AL512408.1-201ENST00000569378 2000 ntBASIC18.59■□□□□ 0.57
UBQLN4Q9NRR5 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.59■□□□□ 0.57
UBQLN4Q9NRR5 KRT17P1-201ENST00000399211 1546 ntBASIC18.59■□□□□ 0.57
UBQLN4Q9NRR5 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC18.58■□□□□ 0.57
UBQLN4Q9NRR5 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.58■□□□□ 0.57
UBQLN4Q9NRR5 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
UBQLN4Q9NRR5 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
UBQLN4Q9NRR5 AL162377.1-201ENST00000618844 1793 ntBASIC18.58■□□□□ 0.57
UBQLN4Q9NRR5 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
UBQLN4Q9NRR5 DPP3P2-201ENST00000416030 1696 ntBASIC18.58■□□□□ 0.57
UBQLN4Q9NRR5 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC18.58■□□□□ 0.56
UBQLN4Q9NRR5 GPX1P1-201ENST00000388829 606 ntBASIC18.58■□□□□ 0.56
UBQLN4Q9NRR5 BX276092.2-201ENST00000417668 665 ntBASIC18.58■□□□□ 0.56
UBQLN4Q9NRR5 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC18.58■□□□□ 0.56
UBQLN4Q9NRR5 TK2-208ENST00000545043 1120 ntTSL 2 BASIC18.58■□□□□ 0.56
UBQLN4Q9NRR5 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC18.58■□□□□ 0.56
UBQLN4Q9NRR5 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
UBQLN4Q9NRR5 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
UBQLN4Q9NRR5 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC18.58■□□□□ 0.56
UBQLN4Q9NRR5 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
UBQLN4Q9NRR5 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
UBQLN4Q9NRR5 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
UBQLN4Q9NRR5 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
UBQLN4Q9NRR5 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
UBQLN4Q9NRR5 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
UBQLN4Q9NRR5 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
UBQLN4Q9NRR5 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
UBQLN4Q9NRR5 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
UBQLN4Q9NRR5 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
UBQLN4Q9NRR5 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
UBQLN4Q9NRR5 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.57■□□□□ 0.56
UBQLN4Q9NRR5 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
UBQLN4Q9NRR5 NXN-202ENST00000537628 1340 ntTSL 3 BASIC18.57■□□□□ 0.56
UBQLN4Q9NRR5 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18.57■□□□□ 0.56
UBQLN4Q9NRR5 SLC29A4P1-201ENST00000398760 971 ntBASIC18.57■□□□□ 0.56
UBQLN4Q9NRR5 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC18.57■□□□□ 0.56
UBQLN4Q9NRR5 AC090192.1-201ENST00000517740 490 ntBASIC18.57■□□□□ 0.56
UBQLN4Q9NRR5 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
UBQLN4Q9NRR5 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC18.57■□□□□ 0.56
UBQLN4Q9NRR5 BRWD1-AS2-201ENST00000603064 1028 ntBASIC18.57■□□□□ 0.56
UBQLN4Q9NRR5 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC18.57■□□□□ 0.56
UBQLN4Q9NRR5 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
UBQLN4Q9NRR5 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
UBQLN4Q9NRR5 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
UBQLN4Q9NRR5 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
UBQLN4Q9NRR5 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC18.57■□□□□ 0.56
UBQLN4Q9NRR5 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.57■□□□□ 0.56
UBQLN4Q9NRR5 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.56■□□□□ 0.56
UBQLN4Q9NRR5 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC18.56■□□□□ 0.56
UBQLN4Q9NRR5 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.56■□□□□ 0.56
UBQLN4Q9NRR5 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
UBQLN4Q9NRR5 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
UBQLN4Q9NRR5 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
UBQLN4Q9NRR5 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
UBQLN4Q9NRR5 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
UBQLN4Q9NRR5 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
UBQLN4Q9NRR5 MAP2K4P1-201ENST00000438453 1195 ntBASIC18.56■□□□□ 0.56
UBQLN4Q9NRR5 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
UBQLN4Q9NRR5 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
UBQLN4Q9NRR5 WT1-AS_3.1-201ENST00000613262 234 ntBASIC18.56■□□□□ 0.56
UBQLN4Q9NRR5 SMG8-203ENST00000578922 2178 ntBASIC18.56■□□□□ 0.56
UBQLN4Q9NRR5 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
UBQLN4Q9NRR5 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
UBQLN4Q9NRR5 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
UBQLN4Q9NRR5 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
UBQLN4Q9NRR5 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
UBQLN4Q9NRR5 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms