Protein–RNA interactions for Protein: Q9NRF8

CTPS2, CTP synthase 2, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS2Q9NRF8 KRT18P11-201ENST00000435214 1283 ntBASIC18.77■□□□□ 0.6
CTPS2Q9NRF8 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC18.77■□□□□ 0.6
CTPS2Q9NRF8 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC18.77■□□□□ 0.6
CTPS2Q9NRF8 BRI3-207ENST00000539286 699 ntTSL 2 BASIC18.77■□□□□ 0.6
CTPS2Q9NRF8 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC18.77■□□□□ 0.6
CTPS2Q9NRF8 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
CTPS2Q9NRF8 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
CTPS2Q9NRF8 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.76■□□□□ 0.59
CTPS2Q9NRF8 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CTPS2Q9NRF8 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
CTPS2Q9NRF8 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CTPS2Q9NRF8 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CTPS2Q9NRF8 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
CTPS2Q9NRF8 ME3-201ENST00000323418 1068 ntTSL 5 BASIC18.76■□□□□ 0.59
CTPS2Q9NRF8 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC18.76■□□□□ 0.59
CTPS2Q9NRF8 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
CTPS2Q9NRF8 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
CTPS2Q9NRF8 AC022517.1-201ENST00000592429 346 ntBASIC18.76■□□□□ 0.59
CTPS2Q9NRF8 AC243732.1-201ENST00000612648 864 ntBASIC18.76■□□□□ 0.59
CTPS2Q9NRF8 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CTPS2Q9NRF8 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC18.76■□□□□ 0.59
CTPS2Q9NRF8 WWOX-218ENST00000627394 894 ntTSL 5 BASIC18.76■□□□□ 0.59
CTPS2Q9NRF8 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
CTPS2Q9NRF8 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
CTPS2Q9NRF8 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CTPS2Q9NRF8 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.76■□□□□ 0.59
CTPS2Q9NRF8 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CTPS2Q9NRF8 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CTPS2Q9NRF8 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CTPS2Q9NRF8 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC18.75■□□□□ 0.59
CTPS2Q9NRF8 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.75■□□□□ 0.59
CTPS2Q9NRF8 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
CTPS2Q9NRF8 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CTPS2Q9NRF8 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CTPS2Q9NRF8 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CTPS2Q9NRF8 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CTPS2Q9NRF8 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.75■□□□□ 0.59
CTPS2Q9NRF8 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC18.75■□□□□ 0.59
CTPS2Q9NRF8 AC006015.1-201ENST00000429970 570 ntBASIC18.75■□□□□ 0.59
CTPS2Q9NRF8 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CTPS2Q9NRF8 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
CTPS2Q9NRF8 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC18.75■□□□□ 0.59
CTPS2Q9NRF8 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.75■□□□□ 0.59
CTPS2Q9NRF8 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
CTPS2Q9NRF8 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CTPS2Q9NRF8 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CTPS2Q9NRF8 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CTPS2Q9NRF8 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC18.74■□□□□ 0.59
CTPS2Q9NRF8 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.74■□□□□ 0.59
CTPS2Q9NRF8 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
CTPS2Q9NRF8 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.74■□□□□ 0.59
CTPS2Q9NRF8 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CTPS2Q9NRF8 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CTPS2Q9NRF8 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
CTPS2Q9NRF8 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.74■□□□□ 0.59
CTPS2Q9NRF8 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CTPS2Q9NRF8 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CTPS2Q9NRF8 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CTPS2Q9NRF8 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
CTPS2Q9NRF8 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CTPS2Q9NRF8 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
CTPS2Q9NRF8 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CTPS2Q9NRF8 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
CTPS2Q9NRF8 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
CTPS2Q9NRF8 AC091799.1-201ENST00000422823 811 ntBASIC18.74■□□□□ 0.59
CTPS2Q9NRF8 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
CTPS2Q9NRF8 PARL-206ENST00000435888 1098 ntTSL 5 BASIC18.74■□□□□ 0.59
CTPS2Q9NRF8 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC18.74■□□□□ 0.59
CTPS2Q9NRF8 AC010536.3-201ENST00000620306 533 ntBASIC18.74■□□□□ 0.59
CTPS2Q9NRF8 MIR2861-201ENST00000636310 90 ntBASIC18.74■□□□□ 0.59
CTPS2Q9NRF8 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.74■□□□□ 0.59
CTPS2Q9NRF8 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
CTPS2Q9NRF8 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.74■□□□□ 0.59
CTPS2Q9NRF8 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CTPS2Q9NRF8 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
CTPS2Q9NRF8 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CTPS2Q9NRF8 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.73■□□□□ 0.59
CTPS2Q9NRF8 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.73■□□□□ 0.59
CTPS2Q9NRF8 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CTPS2Q9NRF8 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CTPS2Q9NRF8 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CTPS2Q9NRF8 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CTPS2Q9NRF8 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
CTPS2Q9NRF8 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
CTPS2Q9NRF8 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CTPS2Q9NRF8 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC18.73■□□□□ 0.59
CTPS2Q9NRF8 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
CTPS2Q9NRF8 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CTPS2Q9NRF8 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CTPS2Q9NRF8 MFSD11-216ENST00000590393 1141 ntBASIC18.73■□□□□ 0.59
CTPS2Q9NRF8 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
CTPS2Q9NRF8 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
CTPS2Q9NRF8 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC18.73■□□□□ 0.59
CTPS2Q9NRF8 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC18.73■□□□□ 0.59
CTPS2Q9NRF8 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CTPS2Q9NRF8 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.73■□□□□ 0.59
CTPS2Q9NRF8 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC18.73■□□□□ 0.59
CTPS2Q9NRF8 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CTPS2Q9NRF8 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CTPS2Q9NRF8 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms