Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
NECTIN3Q9NQS3 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
NECTIN3Q9NQS3 AL512625.2-201ENST00000417533 625 ntBASIC19.33■□□□□ 0.68
NECTIN3Q9NQS3 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NECTIN3Q9NQS3 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.33■□□□□ 0.68
NECTIN3Q9NQS3 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
NECTIN3Q9NQS3 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC19.33■□□□□ 0.68
NECTIN3Q9NQS3 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC19.33■□□□□ 0.68
NECTIN3Q9NQS3 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NECTIN3Q9NQS3 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
NECTIN3Q9NQS3 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.33■□□□□ 0.68
NECTIN3Q9NQS3 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.33■□□□□ 0.68
NECTIN3Q9NQS3 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
NECTIN3Q9NQS3 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NECTIN3Q9NQS3 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NECTIN3Q9NQS3 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NECTIN3Q9NQS3 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NECTIN3Q9NQS3 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.32■□□□□ 0.68
NECTIN3Q9NQS3 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
NECTIN3Q9NQS3 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NECTIN3Q9NQS3 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.32■□□□□ 0.68
NECTIN3Q9NQS3 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NECTIN3Q9NQS3 PHB2-213ENST00000546111 858 ntTSL 2 BASIC19.32■□□□□ 0.68
NECTIN3Q9NQS3 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC19.32■□□□□ 0.68
NECTIN3Q9NQS3 MARS-234ENST00000630571 216 ntTSL 5 BASIC19.32■□□□□ 0.68
NECTIN3Q9NQS3 MARS-235ENST00000630803 183 ntTSL 3 BASIC19.32■□□□□ 0.68
NECTIN3Q9NQS3 GAMT-205ENST00000640762 751 ntTSL 5 BASIC19.32■□□□□ 0.68
NECTIN3Q9NQS3 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NECTIN3Q9NQS3 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
NECTIN3Q9NQS3 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC19.32■□□□□ 0.68
NECTIN3Q9NQS3 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NECTIN3Q9NQS3 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NECTIN3Q9NQS3 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NECTIN3Q9NQS3 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NECTIN3Q9NQS3 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
NECTIN3Q9NQS3 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC19.32■□□□□ 0.68
NECTIN3Q9NQS3 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NECTIN3Q9NQS3 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NECTIN3Q9NQS3 MKRN4P-201ENST00000444706 1521 ntBASIC19.31■□□□□ 0.68
NECTIN3Q9NQS3 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
NECTIN3Q9NQS3 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.31■□□□□ 0.68
NECTIN3Q9NQS3 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NECTIN3Q9NQS3 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NECTIN3Q9NQS3 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
NECTIN3Q9NQS3 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.31■□□□□ 0.68
NECTIN3Q9NQS3 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
NECTIN3Q9NQS3 AC010980.2-201ENST00000587099 1412 ntBASIC19.31■□□□□ 0.68
NECTIN3Q9NQS3 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NECTIN3Q9NQS3 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
NECTIN3Q9NQS3 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NECTIN3Q9NQS3 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NECTIN3Q9NQS3 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.3■□□□□ 0.68
NECTIN3Q9NQS3 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
NECTIN3Q9NQS3 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.3■□□□□ 0.68
NECTIN3Q9NQS3 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
NECTIN3Q9NQS3 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NECTIN3Q9NQS3 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NECTIN3Q9NQS3 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NECTIN3Q9NQS3 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.3■□□□□ 0.68
NECTIN3Q9NQS3 AC011484.1-201ENST00000377652 1995 ntBASIC19.3■□□□□ 0.68
NECTIN3Q9NQS3 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
NECTIN3Q9NQS3 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NECTIN3Q9NQS3 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NECTIN3Q9NQS3 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
NECTIN3Q9NQS3 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.3■□□□□ 0.68
NECTIN3Q9NQS3 SLC29A4P1-201ENST00000398760 971 ntBASIC19.3■□□□□ 0.68
NECTIN3Q9NQS3 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC19.3■□□□□ 0.68
NECTIN3Q9NQS3 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC19.3■□□□□ 0.68
NECTIN3Q9NQS3 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC19.3■□□□□ 0.68
NECTIN3Q9NQS3 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC19.3■□□□□ 0.68
NECTIN3Q9NQS3 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NECTIN3Q9NQS3 AC121338.2-201ENST00000622535 1744 ntBASIC19.3■□□□□ 0.68
NECTIN3Q9NQS3 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
NECTIN3Q9NQS3 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NECTIN3Q9NQS3 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.3■□□□□ 0.68
NECTIN3Q9NQS3 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NECTIN3Q9NQS3 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
NECTIN3Q9NQS3 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
NECTIN3Q9NQS3 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NECTIN3Q9NQS3 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NECTIN3Q9NQS3 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
NECTIN3Q9NQS3 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NECTIN3Q9NQS3 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.3■□□□□ 0.68
NECTIN3Q9NQS3 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
NECTIN3Q9NQS3 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
NECTIN3Q9NQS3 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.29■□□□□ 0.68
NECTIN3Q9NQS3 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
NECTIN3Q9NQS3 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.29■□□□□ 0.68
NECTIN3Q9NQS3 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NECTIN3Q9NQS3 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NECTIN3Q9NQS3 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC19.29■□□□□ 0.68
NECTIN3Q9NQS3 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC19.29■□□□□ 0.68
NECTIN3Q9NQS3 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NECTIN3Q9NQS3 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NECTIN3Q9NQS3 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NECTIN3Q9NQS3 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.29■□□□□ 0.68
NECTIN3Q9NQS3 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NECTIN3Q9NQS3 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NECTIN3Q9NQS3 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
NECTIN3Q9NQS3 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms