Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
POLR1BQ9H9Y6 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
POLR1BQ9H9Y6 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
POLR1BQ9H9Y6 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC19.92■□□□□ 0.78
POLR1BQ9H9Y6 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
POLR1BQ9H9Y6 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
POLR1BQ9H9Y6 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
POLR1BQ9H9Y6 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
POLR1BQ9H9Y6 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
POLR1BQ9H9Y6 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC19.92■□□□□ 0.78
POLR1BQ9H9Y6 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
POLR1BQ9H9Y6 AL355472.2-201ENST00000422958 438 ntBASIC19.92■□□□□ 0.78
POLR1BQ9H9Y6 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC19.92■□□□□ 0.78
POLR1BQ9H9Y6 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC19.92■□□□□ 0.78
POLR1BQ9H9Y6 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
POLR1BQ9H9Y6 LINC01006-201ENST00000333319 2292 ntBASIC19.92■□□□□ 0.78
POLR1BQ9H9Y6 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC19.92■□□□□ 0.78
POLR1BQ9H9Y6 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19.92■□□□□ 0.78
POLR1BQ9H9Y6 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.92■□□□□ 0.78
POLR1BQ9H9Y6 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
POLR1BQ9H9Y6 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
POLR1BQ9H9Y6 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
POLR1BQ9H9Y6 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.91■□□□□ 0.78
POLR1BQ9H9Y6 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
POLR1BQ9H9Y6 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
POLR1BQ9H9Y6 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
POLR1BQ9H9Y6 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
POLR1BQ9H9Y6 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
POLR1BQ9H9Y6 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.91■□□□□ 0.78
POLR1BQ9H9Y6 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
POLR1BQ9H9Y6 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
POLR1BQ9H9Y6 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
POLR1BQ9H9Y6 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC19.91■□□□□ 0.78
POLR1BQ9H9Y6 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
POLR1BQ9H9Y6 CYP2T3P-201ENST00000601990 817 ntBASIC19.91■□□□□ 0.78
POLR1BQ9H9Y6 FAM197Y4-202ENST00000622692 608 ntBASIC19.91■□□□□ 0.78
POLR1BQ9H9Y6 FEM1AP4-201ENST00000443167 1987 ntBASIC19.91■□□□□ 0.78
POLR1BQ9H9Y6 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
POLR1BQ9H9Y6 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
POLR1BQ9H9Y6 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
POLR1BQ9H9Y6 Z98882.1-201ENST00000622160 2253 ntBASIC19.91■□□□□ 0.78
POLR1BQ9H9Y6 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
POLR1BQ9H9Y6 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
POLR1BQ9H9Y6 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
POLR1BQ9H9Y6 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
POLR1BQ9H9Y6 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
POLR1BQ9H9Y6 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
POLR1BQ9H9Y6 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
POLR1BQ9H9Y6 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
POLR1BQ9H9Y6 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
POLR1BQ9H9Y6 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
POLR1BQ9H9Y6 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC19.9■□□□□ 0.78
POLR1BQ9H9Y6 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC19.9■□□□□ 0.78
POLR1BQ9H9Y6 CDV3P1-201ENST00000471403 739 ntBASIC19.9■□□□□ 0.78
POLR1BQ9H9Y6 RNF121-214ENST00000533380 870 ntTSL 3 BASIC19.9■□□□□ 0.78
POLR1BQ9H9Y6 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC19.9■□□□□ 0.78
POLR1BQ9H9Y6 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC19.9■□□□□ 0.78
POLR1BQ9H9Y6 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC19.9■□□□□ 0.78
POLR1BQ9H9Y6 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
POLR1BQ9H9Y6 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC19.9■□□□□ 0.78
POLR1BQ9H9Y6 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
POLR1BQ9H9Y6 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
POLR1BQ9H9Y6 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.9■□□□□ 0.78
POLR1BQ9H9Y6 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
POLR1BQ9H9Y6 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
POLR1BQ9H9Y6 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.9■□□□□ 0.78
POLR1BQ9H9Y6 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
POLR1BQ9H9Y6 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
POLR1BQ9H9Y6 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
POLR1BQ9H9Y6 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
POLR1BQ9H9Y6 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
POLR1BQ9H9Y6 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
POLR1BQ9H9Y6 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC19.89■□□□□ 0.77
POLR1BQ9H9Y6 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC19.89■□□□□ 0.77
POLR1BQ9H9Y6 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
POLR1BQ9H9Y6 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC19.89■□□□□ 0.77
POLR1BQ9H9Y6 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
POLR1BQ9H9Y6 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
POLR1BQ9H9Y6 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC19.89■□□□□ 0.77
POLR1BQ9H9Y6 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
POLR1BQ9H9Y6 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
POLR1BQ9H9Y6 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
POLR1BQ9H9Y6 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
POLR1BQ9H9Y6 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
POLR1BQ9H9Y6 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.88■□□□□ 0.77
POLR1BQ9H9Y6 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
POLR1BQ9H9Y6 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC19.88■□□□□ 0.77
POLR1BQ9H9Y6 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC19.88■□□□□ 0.77
POLR1BQ9H9Y6 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
POLR1BQ9H9Y6 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
POLR1BQ9H9Y6 KRT17P3-201ENST00000420566 1262 ntBASIC19.88■□□□□ 0.77
POLR1BQ9H9Y6 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC19.88■□□□□ 0.77
POLR1BQ9H9Y6 RPPH1-201ENST00000516869 333 ntBASIC19.88■□□□□ 0.77
POLR1BQ9H9Y6 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
POLR1BQ9H9Y6 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC19.88■□□□□ 0.77
POLR1BQ9H9Y6 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC19.88■□□□□ 0.77
POLR1BQ9H9Y6 AL589743.5-201ENST00000616611 1050 ntBASIC19.88■□□□□ 0.77
POLR1BQ9H9Y6 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
POLR1BQ9H9Y6 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
POLR1BQ9H9Y6 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms