Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
LCE3DQ9BYE3 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
LCE3DQ9BYE3 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
LCE3DQ9BYE3 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC5.46□□□□□ -1.54
LCE3DQ9BYE3 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
LCE3DQ9BYE3 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
LCE3DQ9BYE3 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC5.46□□□□□ -1.54
LCE3DQ9BYE3 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
LCE3DQ9BYE3 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
LCE3DQ9BYE3 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
LCE3DQ9BYE3 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
LCE3DQ9BYE3 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
LCE3DQ9BYE3 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
LCE3DQ9BYE3 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC5.46□□□□□ -1.54
LCE3DQ9BYE3 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC5.46□□□□□ -1.54
LCE3DQ9BYE3 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
LCE3DQ9BYE3 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
LCE3DQ9BYE3 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
LCE3DQ9BYE3 STX5-203ENST00000394690 1568 ntTSL 5 BASIC5.46□□□□□ -1.54
LCE3DQ9BYE3 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
LCE3DQ9BYE3 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
LCE3DQ9BYE3 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC5.46□□□□□ -1.54
LCE3DQ9BYE3 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC5.46□□□□□ -1.54
LCE3DQ9BYE3 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC5.46□□□□□ -1.54
LCE3DQ9BYE3 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC5.46□□□□□ -1.54
LCE3DQ9BYE3 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
LCE3DQ9BYE3 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC5.46□□□□□ -1.54
LCE3DQ9BYE3 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
LCE3DQ9BYE3 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
LCE3DQ9BYE3 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
LCE3DQ9BYE3 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC5.45□□□□□ -1.54
LCE3DQ9BYE3 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
LCE3DQ9BYE3 TNXA-203ENST00000507684 2038 ntBASIC5.45□□□□□ -1.54
LCE3DQ9BYE3 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
LCE3DQ9BYE3 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
LCE3DQ9BYE3 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC5.45□□□□□ -1.54
LCE3DQ9BYE3 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
LCE3DQ9BYE3 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
LCE3DQ9BYE3 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
LCE3DQ9BYE3 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
LCE3DQ9BYE3 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
LCE3DQ9BYE3 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC5.45□□□□□ -1.54
LCE3DQ9BYE3 AP004607.7-201ENST00000527152 1677 ntBASIC5.45□□□□□ -1.54
LCE3DQ9BYE3 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC5.45□□□□□ -1.54
LCE3DQ9BYE3 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC5.45□□□□□ -1.54
LCE3DQ9BYE3 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
LCE3DQ9BYE3 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
LCE3DQ9BYE3 KRT18P60-201ENST00000312876 1297 ntBASIC5.45□□□□□ -1.54
LCE3DQ9BYE3 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
LCE3DQ9BYE3 SENP5-202ENST00000419026 973 ntTSL 3 BASIC5.45□□□□□ -1.54
LCE3DQ9BYE3 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC5.45□□□□□ -1.54
LCE3DQ9BYE3 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC5.45□□□□□ -1.54
LCE3DQ9BYE3 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
LCE3DQ9BYE3 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC5.45□□□□□ -1.54
LCE3DQ9BYE3 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
LCE3DQ9BYE3 AC137630.3-201ENST00000607245 391 ntBASIC5.45□□□□□ -1.54
LCE3DQ9BYE3 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
LCE3DQ9BYE3 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC5.45□□□□□ -1.54
LCE3DQ9BYE3 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
LCE3DQ9BYE3 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC5.45□□□□□ -1.54
LCE3DQ9BYE3 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC5.45□□□□□ -1.54
LCE3DQ9BYE3 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
LCE3DQ9BYE3 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
LCE3DQ9BYE3 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC5.45□□□□□ -1.54
LCE3DQ9BYE3 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
LCE3DQ9BYE3 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC5.45□□□□□ -1.54
LCE3DQ9BYE3 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
LCE3DQ9BYE3 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
LCE3DQ9BYE3 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
LCE3DQ9BYE3 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
LCE3DQ9BYE3 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
LCE3DQ9BYE3 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC5.45□□□□□ -1.54
LCE3DQ9BYE3 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC5.45□□□□□ -1.54
LCE3DQ9BYE3 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
LCE3DQ9BYE3 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
LCE3DQ9BYE3 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
LCE3DQ9BYE3 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
LCE3DQ9BYE3 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
LCE3DQ9BYE3 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
LCE3DQ9BYE3 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC5.45□□□□□ -1.54
LCE3DQ9BYE3 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
LCE3DQ9BYE3 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
LCE3DQ9BYE3 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC5.45□□□□□ -1.54
LCE3DQ9BYE3 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
LCE3DQ9BYE3 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
LCE3DQ9BYE3 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
LCE3DQ9BYE3 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
LCE3DQ9BYE3 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
LCE3DQ9BYE3 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC5.45□□□□□ -1.54
LCE3DQ9BYE3 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC5.45□□□□□ -1.54
LCE3DQ9BYE3 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
LCE3DQ9BYE3 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
LCE3DQ9BYE3 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC5.45□□□□□ -1.54
LCE3DQ9BYE3 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
LCE3DQ9BYE3 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC5.44□□□□□ -1.54
LCE3DQ9BYE3 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC5.44□□□□□ -1.54
LCE3DQ9BYE3 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC5.44□□□□□ -1.54
LCE3DQ9BYE3 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
LCE3DQ9BYE3 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
LCE3DQ9BYE3 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms