Protein–RNA interactions for Protein: Q99728

BARD1, BRCA1-associated RING domain protein 1, humanhuman

Known RBP Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BARD1Q99728 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC19.3■□□□□ 0.68
BARD1Q99728 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
BARD1Q99728 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
BARD1Q99728 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
BARD1Q99728 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.29■□□□□ 0.68
BARD1Q99728 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
BARD1Q99728 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
BARD1Q99728 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
BARD1Q99728 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
BARD1Q99728 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
BARD1Q99728 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.29■□□□□ 0.68
BARD1Q99728 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
BARD1Q99728 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC19.29■□□□□ 0.68
BARD1Q99728 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
BARD1Q99728 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.29■□□□□ 0.68
BARD1Q99728 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC19.29■□□□□ 0.68
BARD1Q99728 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
BARD1Q99728 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
BARD1Q99728 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
BARD1Q99728 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC19.29■□□□□ 0.68
BARD1Q99728 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
BARD1Q99728 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
BARD1Q99728 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
BARD1Q99728 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
BARD1Q99728 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC19.28■□□□□ 0.68
BARD1Q99728 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
BARD1Q99728 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
BARD1Q99728 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
BARD1Q99728 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
BARD1Q99728 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.28■□□□□ 0.68
BARD1Q99728 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
BARD1Q99728 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
BARD1Q99728 PRORSD1P-201ENST00000295112 541 ntBASIC19.28■□□□□ 0.68
BARD1Q99728 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
BARD1Q99728 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
BARD1Q99728 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC19.28■□□□□ 0.68
BARD1Q99728 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
BARD1Q99728 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC19.28■□□□□ 0.68
BARD1Q99728 PLLP-204ENST00000569059 665 ntTSL 3 BASIC19.28■□□□□ 0.68
BARD1Q99728 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC19.28■□□□□ 0.68
BARD1Q99728 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
BARD1Q99728 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.28■□□□□ 0.68
BARD1Q99728 MKRN4P-201ENST00000444706 1521 ntBASIC19.28■□□□□ 0.68
BARD1Q99728 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
BARD1Q99728 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
BARD1Q99728 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
BARD1Q99728 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
BARD1Q99728 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
BARD1Q99728 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.28■□□□□ 0.68
BARD1Q99728 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.28■□□□□ 0.68
BARD1Q99728 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
BARD1Q99728 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
BARD1Q99728 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
BARD1Q99728 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
BARD1Q99728 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC19.27■□□□□ 0.68
BARD1Q99728 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
BARD1Q99728 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
BARD1Q99728 NAA20-201ENST00000310450 920 ntTSL 2 BASIC19.27■□□□□ 0.68
BARD1Q99728 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC19.27■□□□□ 0.68
BARD1Q99728 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
BARD1Q99728 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC19.27■□□□□ 0.68
BARD1Q99728 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC19.27■□□□□ 0.68
BARD1Q99728 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
BARD1Q99728 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
BARD1Q99728 AC121338.2-201ENST00000622535 1744 ntBASIC19.27■□□□□ 0.68
BARD1Q99728 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.27■□□□□ 0.68
BARD1Q99728 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
BARD1Q99728 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
BARD1Q99728 AC020907.5-201ENST00000624372 1936 ntBASIC19.27■□□□□ 0.67
BARD1Q99728 STX5-203ENST00000394690 1568 ntTSL 5 BASIC19.27■□□□□ 0.67
BARD1Q99728 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
BARD1Q99728 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.27■□□□□ 0.67
BARD1Q99728 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC19.27■□□□□ 0.67
BARD1Q99728 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.26■□□□□ 0.67
BARD1Q99728 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.26■□□□□ 0.67
BARD1Q99728 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
BARD1Q99728 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
BARD1Q99728 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC19.26■□□□□ 0.67
BARD1Q99728 KRT18P29-201ENST00000397031 1267 ntBASIC19.26■□□□□ 0.67
BARD1Q99728 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
BARD1Q99728 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
BARD1Q99728 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC19.26■□□□□ 0.67
BARD1Q99728 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC19.26■□□□□ 0.67
BARD1Q99728 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC19.26■□□□□ 0.67
BARD1Q99728 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
BARD1Q99728 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
BARD1Q99728 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
BARD1Q99728 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.26■□□□□ 0.67
BARD1Q99728 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.26■□□□□ 0.67
BARD1Q99728 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
BARD1Q99728 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
BARD1Q99728 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
BARD1Q99728 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
BARD1Q99728 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
BARD1Q99728 AC007225.1-201ENST00000566331 1836 ntBASIC19.25■□□□□ 0.67
BARD1Q99728 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
BARD1Q99728 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
BARD1Q99728 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
BARD1Q99728 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.25■□□□□ 0.67
BARD1Q99728 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms