Protein–RNA interactions for Protein: Q99614

TTC1, Tetratricopeptide repeat protein 1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC1Q99614 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TTC1Q99614 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.42■□□□□ 0.86
TTC1Q99614 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.42■□□□□ 0.86
TTC1Q99614 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
TTC1Q99614 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
TTC1Q99614 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TTC1Q99614 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
TTC1Q99614 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TTC1Q99614 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
TTC1Q99614 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TTC1Q99614 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
TTC1Q99614 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TTC1Q99614 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TTC1Q99614 AFG3L1P-217ENST00000557444 2447 ntBASIC20.41■□□□□ 0.86
TTC1Q99614 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
TTC1Q99614 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TTC1Q99614 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
TTC1Q99614 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC20.41■□□□□ 0.86
TTC1Q99614 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC20.41■□□□□ 0.86
TTC1Q99614 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
TTC1Q99614 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
TTC1Q99614 MCC-208ENST00000514701 2855 ntTSL 2 BASIC20.41■□□□□ 0.86
TTC1Q99614 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TTC1Q99614 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TTC1Q99614 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TTC1Q99614 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TTC1Q99614 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
TTC1Q99614 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TTC1Q99614 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.41■□□□□ 0.86
TTC1Q99614 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TTC1Q99614 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TTC1Q99614 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TTC1Q99614 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TTC1Q99614 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC20.4■□□□□ 0.86
TTC1Q99614 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TTC1Q99614 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
TTC1Q99614 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
TTC1Q99614 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TTC1Q99614 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
TTC1Q99614 CASP6-205ENST00000505486 538 ntTSL 4 BASIC20.4■□□□□ 0.86
TTC1Q99614 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.4■□□□□ 0.86
TTC1Q99614 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TTC1Q99614 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TTC1Q99614 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
TTC1Q99614 AC027702.1-201ENST00000563810 1770 ntBASIC20.4■□□□□ 0.86
TTC1Q99614 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TTC1Q99614 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TTC1Q99614 AC231657.2-201ENST00000624556 255 ntBASIC20.4■□□□□ 0.86
TTC1Q99614 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TTC1Q99614 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TTC1Q99614 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
TTC1Q99614 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
TTC1Q99614 AC007225.1-201ENST00000566331 1836 ntBASIC20.39■□□□□ 0.86
TTC1Q99614 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.39■□□□□ 0.86
TTC1Q99614 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.39■□□□□ 0.86
TTC1Q99614 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.39■□□□□ 0.85
TTC1Q99614 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
TTC1Q99614 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.39■□□□□ 0.85
TTC1Q99614 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
TTC1Q99614 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TTC1Q99614 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
TTC1Q99614 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TTC1Q99614 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
TTC1Q99614 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
TTC1Q99614 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
TTC1Q99614 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC20.39■□□□□ 0.85
TTC1Q99614 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TTC1Q99614 PGM5P4-201ENST00000421970 445 ntBASIC20.39■□□□□ 0.85
TTC1Q99614 AL137784.2-201ENST00000607332 1000 ntBASIC20.39■□□□□ 0.85
TTC1Q99614 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
TTC1Q99614 AC087289.5-201ENST00000586076 3175 ntBASIC20.39■□□□□ 0.85
TTC1Q99614 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TTC1Q99614 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TTC1Q99614 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
TTC1Q99614 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TTC1Q99614 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
TTC1Q99614 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TTC1Q99614 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
TTC1Q99614 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
TTC1Q99614 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TTC1Q99614 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TTC1Q99614 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TTC1Q99614 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
TTC1Q99614 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TTC1Q99614 BET1L-204ENST00000410108 637 ntTSL 3 BASIC20.38■□□□□ 0.85
TTC1Q99614 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC20.38■□□□□ 0.85
TTC1Q99614 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC20.38■□□□□ 0.85
TTC1Q99614 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC20.38■□□□□ 0.85
TTC1Q99614 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TTC1Q99614 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TTC1Q99614 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TTC1Q99614 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TTC1Q99614 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
TTC1Q99614 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
TTC1Q99614 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TTC1Q99614 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TTC1Q99614 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TTC1Q99614 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
TTC1Q99614 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
TTC1Q99614 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms