Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
RAB40CQ96S21 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC16.36■□□□□ 0.21
RAB40CQ96S21 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC16.36■□□□□ 0.21
RAB40CQ96S21 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RAB40CQ96S21 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
RAB40CQ96S21 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC16.36■□□□□ 0.21
RAB40CQ96S21 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RAB40CQ96S21 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC16.36■□□□□ 0.21
RAB40CQ96S21 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC16.36■□□□□ 0.21
RAB40CQ96S21 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC16.36■□□□□ 0.21
RAB40CQ96S21 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RAB40CQ96S21 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RAB40CQ96S21 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC16.36■□□□□ 0.21
RAB40CQ96S21 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC16.36■□□□□ 0.21
RAB40CQ96S21 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC16.36■□□□□ 0.21
RAB40CQ96S21 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RAB40CQ96S21 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC16.35■□□□□ 0.21
RAB40CQ96S21 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
RAB40CQ96S21 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC16.35■□□□□ 0.21
RAB40CQ96S21 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RAB40CQ96S21 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RAB40CQ96S21 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC16.35■□□□□ 0.21
RAB40CQ96S21 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RAB40CQ96S21 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RAB40CQ96S21 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RAB40CQ96S21 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RAB40CQ96S21 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RAB40CQ96S21 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
RAB40CQ96S21 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC16.35■□□□□ 0.21
RAB40CQ96S21 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RAB40CQ96S21 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RAB40CQ96S21 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RAB40CQ96S21 PTMA-205ENST00000410064 814 ntTSL 2 BASIC16.35■□□□□ 0.21
RAB40CQ96S21 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC16.35■□□□□ 0.21
RAB40CQ96S21 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC16.35■□□□□ 0.21
RAB40CQ96S21 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RAB40CQ96S21 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RAB40CQ96S21 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
RAB40CQ96S21 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RAB40CQ96S21 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
RAB40CQ96S21 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RAB40CQ96S21 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC16.35■□□□□ 0.21
RAB40CQ96S21 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC16.35■□□□□ 0.21
RAB40CQ96S21 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RAB40CQ96S21 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RAB40CQ96S21 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RAB40CQ96S21 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RAB40CQ96S21 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
RAB40CQ96S21 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAB40CQ96S21 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAB40CQ96S21 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC16.34■□□□□ 0.21
RAB40CQ96S21 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
RAB40CQ96S21 HCG11-201ENST00000411553 5696 ntBASIC16.34■□□□□ 0.21
RAB40CQ96S21 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RAB40CQ96S21 UNC93B3-201ENST00000308076 687 ntBASIC16.34■□□□□ 0.21
RAB40CQ96S21 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RAB40CQ96S21 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC16.34■□□□□ 0.21
RAB40CQ96S21 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RAB40CQ96S21 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC16.34■□□□□ 0.21
RAB40CQ96S21 POU5F1P4-201ENST00000413175 1085 ntBASIC16.34■□□□□ 0.21
RAB40CQ96S21 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RAB40CQ96S21 IGHV3-19-201ENST00000521488 291 ntBASIC16.34■□□□□ 0.21
RAB40CQ96S21 AICDA-202ENST00000537228 667 ntTSL 5 BASIC16.34■□□□□ 0.21
RAB40CQ96S21 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC16.34■□□□□ 0.21
RAB40CQ96S21 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC16.34■□□□□ 0.21
RAB40CQ96S21 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RAB40CQ96S21 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
RAB40CQ96S21 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC16.34■□□□□ 0.21
RAB40CQ96S21 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RAB40CQ96S21 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAB40CQ96S21 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAB40CQ96S21 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAB40CQ96S21 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAB40CQ96S21 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAB40CQ96S21 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
RAB40CQ96S21 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
RAB40CQ96S21 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RAB40CQ96S21 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RAB40CQ96S21 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RAB40CQ96S21 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RAB40CQ96S21 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
RAB40CQ96S21 LHPP-203ENST00000392757 840 ntTSL 3 BASIC16.33■□□□□ 0.2
RAB40CQ96S21 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
RAB40CQ96S21 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC16.33■□□□□ 0.2
RAB40CQ96S21 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
RAB40CQ96S21 AC126544.1-201ENST00000580842 1059 ntBASIC16.33■□□□□ 0.2
RAB40CQ96S21 AC008175.2-201ENST00000612840 297 ntBASIC16.33■□□□□ 0.2
RAB40CQ96S21 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC16.33■□□□□ 0.2
RAB40CQ96S21 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC16.33■□□□□ 0.2
RAB40CQ96S21 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC16.33■□□□□ 0.2
RAB40CQ96S21 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
RAB40CQ96S21 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC16.33■□□□□ 0.2
RAB40CQ96S21 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC16.33■□□□□ 0.2
RAB40CQ96S21 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
RAB40CQ96S21 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RAB40CQ96S21 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC16.33■□□□□ 0.2
RAB40CQ96S21 POLI-202ENST00000406285 2030 ntTSL 2 BASIC16.33■□□□□ 0.2
RAB40CQ96S21 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RAB40CQ96S21 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RAB40CQ96S21 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms