Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CMTM3Q96MX0 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC17.37■□□□□ 0.37
CMTM3Q96MX0 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
CMTM3Q96MX0 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC17.37■□□□□ 0.37
CMTM3Q96MX0 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CMTM3Q96MX0 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC17.37■□□□□ 0.37
CMTM3Q96MX0 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CMTM3Q96MX0 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CMTM3Q96MX0 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
CMTM3Q96MX0 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CMTM3Q96MX0 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CMTM3Q96MX0 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CMTM3Q96MX0 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CMTM3Q96MX0 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC17.37■□□□□ 0.37
CMTM3Q96MX0 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
CMTM3Q96MX0 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC17.36■□□□□ 0.37
CMTM3Q96MX0 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CMTM3Q96MX0 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CMTM3Q96MX0 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CMTM3Q96MX0 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
CMTM3Q96MX0 AC009299.2-201ENST00000482477 511 ntBASIC17.36■□□□□ 0.37
CMTM3Q96MX0 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CMTM3Q96MX0 AL512631.2-201ENST00000604634 923 ntBASIC17.36■□□□□ 0.37
CMTM3Q96MX0 AC008175.2-201ENST00000612840 297 ntBASIC17.36■□□□□ 0.37
CMTM3Q96MX0 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
CMTM3Q96MX0 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CMTM3Q96MX0 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC17.36■□□□□ 0.37
CMTM3Q96MX0 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CMTM3Q96MX0 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CMTM3Q96MX0 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
CMTM3Q96MX0 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CMTM3Q96MX0 AC116050.2-201ENST00000612102 1779 ntBASIC17.35■□□□□ 0.37
CMTM3Q96MX0 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC17.35■□□□□ 0.37
CMTM3Q96MX0 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CMTM3Q96MX0 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CMTM3Q96MX0 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CMTM3Q96MX0 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
CMTM3Q96MX0 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.35■□□□□ 0.37
CMTM3Q96MX0 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CMTM3Q96MX0 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CMTM3Q96MX0 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CMTM3Q96MX0 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CMTM3Q96MX0 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC17.35■□□□□ 0.37
CMTM3Q96MX0 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
CMTM3Q96MX0 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CMTM3Q96MX0 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC17.35■□□□□ 0.37
CMTM3Q96MX0 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
CMTM3Q96MX0 DPP3P2-201ENST00000416030 1696 ntBASIC17.35■□□□□ 0.37
CMTM3Q96MX0 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CMTM3Q96MX0 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CMTM3Q96MX0 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
CMTM3Q96MX0 PTGES2-AS1-201ENST00000443493 2100 ntBASIC17.35■□□□□ 0.37
CMTM3Q96MX0 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CMTM3Q96MX0 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CMTM3Q96MX0 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
CMTM3Q96MX0 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CMTM3Q96MX0 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CMTM3Q96MX0 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
CMTM3Q96MX0 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CMTM3Q96MX0 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CMTM3Q96MX0 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CMTM3Q96MX0 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CMTM3Q96MX0 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CMTM3Q96MX0 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CMTM3Q96MX0 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CMTM3Q96MX0 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CMTM3Q96MX0 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CMTM3Q96MX0 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CMTM3Q96MX0 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC17.34■□□□□ 0.37
CMTM3Q96MX0 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC17.34■□□□□ 0.37
CMTM3Q96MX0 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CMTM3Q96MX0 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CMTM3Q96MX0 BX842568.3-201ENST00000418104 571 ntBASIC17.34■□□□□ 0.37
CMTM3Q96MX0 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC17.34■□□□□ 0.37
CMTM3Q96MX0 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CMTM3Q96MX0 AC245052.3-201ENST00000450182 901 ntBASIC17.34■□□□□ 0.37
CMTM3Q96MX0 KRT8P36-201ENST00000489121 1440 ntBASIC17.34■□□□□ 0.37
CMTM3Q96MX0 QDPR-206ENST00000508623 601 ntTSL 3 BASIC17.34■□□□□ 0.37
CMTM3Q96MX0 AC079598.2-202ENST00000546624 1451 ntBASIC17.34■□□□□ 0.37
CMTM3Q96MX0 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CMTM3Q96MX0 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC17.34■□□□□ 0.37
CMTM3Q96MX0 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CMTM3Q96MX0 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CMTM3Q96MX0 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CMTM3Q96MX0 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CMTM3Q96MX0 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CMTM3Q96MX0 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CMTM3Q96MX0 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CMTM3Q96MX0 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CMTM3Q96MX0 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC17.34■□□□□ 0.37
CMTM3Q96MX0 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CMTM3Q96MX0 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.33■□□□□ 0.37
CMTM3Q96MX0 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CMTM3Q96MX0 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
CMTM3Q96MX0 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC17.33■□□□□ 0.37
CMTM3Q96MX0 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CMTM3Q96MX0 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
CMTM3Q96MX0 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
CMTM3Q96MX0 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CMTM3Q96MX0 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms