Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC18.35■□□□□ 0.53
HPS1Q92902 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
HPS1Q92902 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
HPS1Q92902 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
HPS1Q92902 GXYLT1P2-201ENST00000433312 1230 ntBASIC18.35■□□□□ 0.53
HPS1Q92902 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC18.35■□□□□ 0.53
HPS1Q92902 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC18.35■□□□□ 0.53
HPS1Q92902 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC18.35■□□□□ 0.53
HPS1Q92902 NTF6G-201ENST00000591094 616 ntBASIC18.35■□□□□ 0.53
HPS1Q92902 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC18.35■□□□□ 0.53
HPS1Q92902 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HPS1Q92902 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
HPS1Q92902 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HPS1Q92902 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HPS1Q92902 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
HPS1Q92902 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HPS1Q92902 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
HPS1Q92902 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.35■□□□□ 0.53
HPS1Q92902 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
HPS1Q92902 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HPS1Q92902 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HPS1Q92902 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
HPS1Q92902 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HPS1Q92902 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
HPS1Q92902 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HPS1Q92902 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
HPS1Q92902 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HPS1Q92902 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HPS1Q92902 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HPS1Q92902 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC18.34■□□□□ 0.53
HPS1Q92902 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
HPS1Q92902 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HPS1Q92902 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HPS1Q92902 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HPS1Q92902 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC18.34■□□□□ 0.53
HPS1Q92902 IKBKGP1-201ENST00000612193 1073 ntBASIC18.34■□□□□ 0.53
HPS1Q92902 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HPS1Q92902 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HPS1Q92902 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HPS1Q92902 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HPS1Q92902 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
HPS1Q92902 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HPS1Q92902 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
HPS1Q92902 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC18.33■□□□□ 0.53
HPS1Q92902 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
HPS1Q92902 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
HPS1Q92902 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC18.33■□□□□ 0.53
HPS1Q92902 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.53
HPS1Q92902 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC18.33■□□□□ 0.53
HPS1Q92902 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.33■□□□□ 0.53
HPS1Q92902 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
HPS1Q92902 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
HPS1Q92902 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
HPS1Q92902 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
HPS1Q92902 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HPS1Q92902 NT5C3AP1-201ENST00000394500 1012 ntBASIC18.33■□□□□ 0.52
HPS1Q92902 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
HPS1Q92902 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
HPS1Q92902 AC090192.1-201ENST00000517740 490 ntBASIC18.33■□□□□ 0.52
HPS1Q92902 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC18.33■□□□□ 0.52
HPS1Q92902 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
HPS1Q92902 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HPS1Q92902 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.33■□□□□ 0.52
HPS1Q92902 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HPS1Q92902 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.52
HPS1Q92902 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HPS1Q92902 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HPS1Q92902 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC18.33■□□□□ 0.52
HPS1Q92902 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HPS1Q92902 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HPS1Q92902 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.33■□□□□ 0.52
HPS1Q92902 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HPS1Q92902 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HPS1Q92902 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HPS1Q92902 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HPS1Q92902 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HPS1Q92902 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HPS1Q92902 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HPS1Q92902 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC18.32■□□□□ 0.52
HPS1Q92902 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HPS1Q92902 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.32■□□□□ 0.52
HPS1Q92902 AC007613.1-201ENST00000572811 2597 ntBASIC18.32■□□□□ 0.52
HPS1Q92902 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.32■□□□□ 0.52
HPS1Q92902 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HPS1Q92902 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HPS1Q92902 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
HPS1Q92902 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
HPS1Q92902 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HPS1Q92902 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC18.32■□□□□ 0.52
HPS1Q92902 AC079089.2-201ENST00000531211 1277 ntBASIC18.32■□□□□ 0.52
HPS1Q92902 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC18.32■□□□□ 0.52
HPS1Q92902 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HPS1Q92902 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
HPS1Q92902 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HPS1Q92902 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.32■□□□□ 0.52
HPS1Q92902 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC18.32■□□□□ 0.52
HPS1Q92902 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.32■□□□□ 0.52
HPS1Q92902 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HPS1Q92902 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
HPS1Q92902 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms