Protein–RNA interactions for Protein: Q8WUY3

PRUNE2, Protein prune homolog 2, humanhuman

Predictions only

Length 3,088 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRUNE2Q8WUY3 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
PRUNE2Q8WUY3 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC21.32■■□□□ 1
PRUNE2Q8WUY3 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC21.32■■□□□ 1
PRUNE2Q8WUY3 CLN6-221ENST00000637494 765 ntTSL 5 BASIC21.32■■□□□ 1
PRUNE2Q8WUY3 AC139530.1-201ENST00000575312 1977 ntBASIC21.32■■□□□ 1
PRUNE2Q8WUY3 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC21.32■■□□□ 1
PRUNE2Q8WUY3 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PRUNE2Q8WUY3 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC21.32■■□□□ 1
PRUNE2Q8WUY3 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PRUNE2Q8WUY3 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PRUNE2Q8WUY3 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PRUNE2Q8WUY3 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
PRUNE2Q8WUY3 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC21.32■■□□□ 1
PRUNE2Q8WUY3 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PRUNE2Q8WUY3 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
PRUNE2Q8WUY3 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC21.32■■□□□ 1
PRUNE2Q8WUY3 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC21.32■■□□□ 1
PRUNE2Q8WUY3 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC21.32■■□□□ 1
PRUNE2Q8WUY3 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PRUNE2Q8WUY3 STK25-205ENST00000405883 1904 ntTSL 2 BASIC21.31■■□□□ 1
PRUNE2Q8WUY3 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC21.31■■□□□ 1
PRUNE2Q8WUY3 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PRUNE2Q8WUY3 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC21.31■■□□□ 1
PRUNE2Q8WUY3 TSPY21P-201ENST00000433481 731 ntBASIC21.31■■□□□ 1
PRUNE2Q8WUY3 TSPY23P-201ENST00000440136 739 ntBASIC21.31■■□□□ 1
PRUNE2Q8WUY3 AL671277.2-201ENST00000458060 996 ntBASIC21.31■■□□□ 1
PRUNE2Q8WUY3 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC21.31■■□□□ 1
PRUNE2Q8WUY3 CALM1-205ENST00000553542 877 ntTSL 5 BASIC21.31■■□□□ 1
PRUNE2Q8WUY3 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC21.31■■□□□ 1
PRUNE2Q8WUY3 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
PRUNE2Q8WUY3 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PRUNE2Q8WUY3 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC21.31■■□□□ 1
PRUNE2Q8WUY3 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
PRUNE2Q8WUY3 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC21.31■■□□□ 1
PRUNE2Q8WUY3 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC21.31■■□□□ 1
PRUNE2Q8WUY3 MESTP1-201ENST00000404287 994 ntBASIC21.31■■□□□ 1
PRUNE2Q8WUY3 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC21.31■■□□□ 1
PRUNE2Q8WUY3 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC21.31■■□□□ 1
PRUNE2Q8WUY3 AL671883.3-201ENST00000603274 991 ntBASIC21.31■■□□□ 1
PRUNE2Q8WUY3 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PRUNE2Q8WUY3 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
PRUNE2Q8WUY3 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
PRUNE2Q8WUY3 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC21.31■■□□□ 1
PRUNE2Q8WUY3 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC21.3■■□□□ 1
PRUNE2Q8WUY3 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PRUNE2Q8WUY3 RNF152P1-201ENST00000397754 604 ntBASIC21.3■■□□□ 1
PRUNE2Q8WUY3 AC128688.1-201ENST00000487626 519 ntBASIC21.3■■□□□ 1
PRUNE2Q8WUY3 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC21.3■■□□□ 1
PRUNE2Q8WUY3 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
PRUNE2Q8WUY3 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC21.3■■□□□ 1
PRUNE2Q8WUY3 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC21.3■■□□□ 1
PRUNE2Q8WUY3 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
PRUNE2Q8WUY3 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
PRUNE2Q8WUY3 KLK8-205ENST00000593490 267 ntTSL 3 BASIC21.3■■□□□ 1
PRUNE2Q8WUY3 AC139530.3-201ENST00000620344 690 ntBASIC21.3■■□□□ 1
PRUNE2Q8WUY3 C9orf163-202ENST00000624034 2573 ntBASIC21.3■■□□□ 1
PRUNE2Q8WUY3 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC21.3■■□□□ 1
PRUNE2Q8WUY3 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC21.3■■□□□ 1
PRUNE2Q8WUY3 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC21.3■■□□□ 1
PRUNE2Q8WUY3 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC21.29■■□□□ 1
PRUNE2Q8WUY3 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC21.29■■□□□ 1
PRUNE2Q8WUY3 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC21.29■■□□□ 1
PRUNE2Q8WUY3 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC21.29■■□□□ 1
PRUNE2Q8WUY3 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
PRUNE2Q8WUY3 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC21.29■■□□□ 1
PRUNE2Q8WUY3 TSPY5P-201ENST00000426936 936 ntBASIC21.29■■□□□ 1
PRUNE2Q8WUY3 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PRUNE2Q8WUY3 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
PRUNE2Q8WUY3 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
PRUNE2Q8WUY3 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC21.29■■□□□ 1
PRUNE2Q8WUY3 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC21.29■■□□□ 1
PRUNE2Q8WUY3 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
PRUNE2Q8WUY3 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC21.29■■□□□ 1
PRUNE2Q8WUY3 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
PRUNE2Q8WUY3 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC21.28■■□□□ 1
PRUNE2Q8WUY3 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC21.28■■□□□ 1
PRUNE2Q8WUY3 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC21.28■■□□□ 1
PRUNE2Q8WUY3 F2R-202ENST00000505600 442 ntTSL 2 BASIC21.28■■□□□ 1
PRUNE2Q8WUY3 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC21.28■■□□□ 1
PRUNE2Q8WUY3 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
PRUNE2Q8WUY3 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PRUNE2Q8WUY3 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PRUNE2Q8WUY3 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC21.28■■□□□ 1
PRUNE2Q8WUY3 PCED1CP-201ENST00000419887 785 ntBASIC21.28■■□□□ 1
PRUNE2Q8WUY3 PTPA-214ENST00000423100 988 ntTSL 2 BASIC21.28■■□□□ 1
PRUNE2Q8WUY3 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC21.28■■□□□ 1
PRUNE2Q8WUY3 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PRUNE2Q8WUY3 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC21.28■■□□□ 1
PRUNE2Q8WUY3 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PRUNE2Q8WUY3 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC21.27■■□□□ 1
PRUNE2Q8WUY3 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC21.27■■□□□ 1
PRUNE2Q8WUY3 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC21.27■■□□□ 1
PRUNE2Q8WUY3 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC21.27■■□□□ 1
PRUNE2Q8WUY3 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC21.27■■□□□ 1
PRUNE2Q8WUY3 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC21.27■■□□□ 1
PRUNE2Q8WUY3 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC21.27■■□□□ 1
PRUNE2Q8WUY3 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC21.27■■□□□ 1
PRUNE2Q8WUY3 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PRUNE2Q8WUY3 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC21.27■■□□□ 1
PRUNE2Q8WUY3 AC130371.2-201ENST00000619443 611 ntBASIC21.27■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms