Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
RAB43Q86YS6 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC19.25■□□□□ 0.67
RAB43Q86YS6 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RAB43Q86YS6 CYP21A1P-202ENST00000354927 1481 ntBASIC19.25■□□□□ 0.67
RAB43Q86YS6 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RAB43Q86YS6 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RAB43Q86YS6 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
RAB43Q86YS6 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC19.25■□□□□ 0.67
RAB43Q86YS6 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC19.25■□□□□ 0.67
RAB43Q86YS6 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RAB43Q86YS6 GCSHP5-201ENST00000443090 522 ntBASIC19.25■□□□□ 0.67
RAB43Q86YS6 AC098590.1-201ENST00000468126 897 ntBASIC19.25■□□□□ 0.67
RAB43Q86YS6 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC19.25■□□□□ 0.67
RAB43Q86YS6 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RAB43Q86YS6 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC19.25■□□□□ 0.67
RAB43Q86YS6 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RAB43Q86YS6 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RAB43Q86YS6 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RAB43Q86YS6 NXN-202ENST00000537628 1340 ntTSL 3 BASIC19.25■□□□□ 0.67
RAB43Q86YS6 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RAB43Q86YS6 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
RAB43Q86YS6 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RAB43Q86YS6 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC19.24■□□□□ 0.67
RAB43Q86YS6 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.24■□□□□ 0.67
RAB43Q86YS6 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.24■□□□□ 0.67
RAB43Q86YS6 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
RAB43Q86YS6 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RAB43Q86YS6 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.24■□□□□ 0.67
RAB43Q86YS6 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
RAB43Q86YS6 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.24■□□□□ 0.67
RAB43Q86YS6 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
RAB43Q86YS6 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RAB43Q86YS6 RPS2P52-201ENST00000469610 820 ntBASIC19.24■□□□□ 0.67
RAB43Q86YS6 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RAB43Q86YS6 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC19.24■□□□□ 0.67
RAB43Q86YS6 AC142381.4-202ENST00000563973 229 ntBASIC19.24■□□□□ 0.67
RAB43Q86YS6 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC19.24■□□□□ 0.67
RAB43Q86YS6 MMD2-204ENST00000612910 778 ntTSL 5 BASIC19.24■□□□□ 0.67
RAB43Q86YS6 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC19.24■□□□□ 0.67
RAB43Q86YS6 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
RAB43Q86YS6 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RAB43Q86YS6 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
RAB43Q86YS6 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
RAB43Q86YS6 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RAB43Q86YS6 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RAB43Q86YS6 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RAB43Q86YS6 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
RAB43Q86YS6 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RAB43Q86YS6 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
RAB43Q86YS6 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RAB43Q86YS6 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RAB43Q86YS6 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RAB43Q86YS6 BAALC-201ENST00000297574 801 ntTSL 3 BASIC19.23■□□□□ 0.67
RAB43Q86YS6 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
RAB43Q86YS6 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC19.23■□□□□ 0.67
RAB43Q86YS6 AL158047.1-201ENST00000445918 881 ntBASIC19.23■□□□□ 0.67
RAB43Q86YS6 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.23■□□□□ 0.67
RAB43Q86YS6 AC105020.6-201ENST00000621523 1217 ntBASIC19.23■□□□□ 0.67
RAB43Q86YS6 AC073648.6-201ENST00000641589 218 ntBASIC19.23■□□□□ 0.67
RAB43Q86YS6 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RAB43Q86YS6 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
RAB43Q86YS6 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC19.23■□□□□ 0.67
RAB43Q86YS6 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RAB43Q86YS6 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RAB43Q86YS6 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
RAB43Q86YS6 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RAB43Q86YS6 AC092368.3-202ENST00000574180 1591 ntBASIC19.23■□□□□ 0.67
RAB43Q86YS6 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RAB43Q86YS6 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC19.22■□□□□ 0.67
RAB43Q86YS6 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RAB43Q86YS6 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RAB43Q86YS6 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
RAB43Q86YS6 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RAB43Q86YS6 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19.22■□□□□ 0.67
RAB43Q86YS6 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RAB43Q86YS6 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RAB43Q86YS6 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RAB43Q86YS6 MFF-205ENST00000354503 1085 ntTSL 2 BASIC19.22■□□□□ 0.67
RAB43Q86YS6 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
RAB43Q86YS6 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC19.22■□□□□ 0.67
RAB43Q86YS6 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC19.22■□□□□ 0.67
RAB43Q86YS6 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RAB43Q86YS6 PNMA6B-201ENST00000538162 1200 ntBASIC19.22■□□□□ 0.67
RAB43Q86YS6 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
RAB43Q86YS6 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RAB43Q86YS6 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RAB43Q86YS6 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
RAB43Q86YS6 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
RAB43Q86YS6 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RAB43Q86YS6 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
RAB43Q86YS6 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RAB43Q86YS6 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RAB43Q86YS6 CRK-204ENST00000574295 1391 ntTSL 5 BASIC19.21■□□□□ 0.67
RAB43Q86YS6 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RAB43Q86YS6 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RAB43Q86YS6 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
RAB43Q86YS6 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
RAB43Q86YS6 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RAB43Q86YS6 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RAB43Q86YS6 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms